PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119681.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 613aa MW: 70774.6 Da PI: 8.8885

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119681.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	65.9	1.1e-20	32	125	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GFs+rks+ +++ ++g++++r + Cs++g+r ++ + +ek+ ++a tr+gCka+++++ + gk++vt+++ +HnHela XP_028119681.1 32 FYNAYAKAKGFSIRKSRFNTN-KEGKVVSRLWLCSRKGQRLPKYLDrvAEKSIAPKALTRVGCKAQFHIRYDAdtgeGGKYVVTHFVADHNHELA 125 9**************9999.666699999******9998866677778************987667789************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 613 aa Download sequence
MVDNAHRNDM VGDVERAILE HKFDLVEDRE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR 60 LWLCSRKGQR LPKYLDRVAE KSIAPKALTR VGCKAQFHIR YDADTGEGGK YVVTHFVADH 120 NHELAEQYCV MYLRSHRTLN SADKAQAMAM RNIGVKTSQI MDYMVNQSGS YENFGFIRMD 180 LHNHIQAERR TEVEDDSKSW ADYAKFGDVL IFDLTYRTNA YKKPFVMLAS VTSHFRTTIF 240 ACVLLANETS ETYTWVLETF MEAMGNKAPV SILTDGDKAM REAIRRVFPN ARHQFCNWHL 300 GKNVVSNVHI SGFAHAFKQC MDMEMDETKF EHGLTTMVEK FGLQTNSWVL ETYEKCHMWA 360 KAYMREHFFA GMKSTQRSEC LNAYFNPFLQ HKLKLYEFVR HYDRALARIR YNEAGDDAET 420 NNTFSDRSWI VTHSPTDAAM RCSYMKFESL GLPCCHIICV IKAENLMQIS LTCVLHRWTR 480 AADKDGQQWP QLSIDSTTTQ TARYGILSSS YNEMCFYASQ STEGFKEARD ACLPMTSRMN 540 ELYERNLNNG NGDKGKHSFP RQFGVEDPDV VKTKRNPGQA SSNYRRLRKC GNCKCIGHTK 600 RTCPKRLGMH VFR

Sequence ? help Back to Top

Protein Sequence Length: 613 aa Download sequence

MVDNAHRNDM VGDVERAILE HKFDLVEDRE AFYNAYAKAK GFSIRKSRFN TNKEGKVVSR  60
LWLCSRKGQR LPKYLDRVAE KSIAPKALTR VGCKAQFHIR YDADTGEGGK YVVTHFVADH  120
NHELAEQYCV MYLRSHRTLN SADKAQAMAM RNIGVKTSQI MDYMVNQSGS YENFGFIRMD  180
LHNHIQAERR TEVEDDSKSW ADYAKFGDVL IFDLTYRTNA YKKPFVMLAS VTSHFRTTIF  240
ACVLLANETS ETYTWVLETF MEAMGNKAPV SILTDGDKAM REAIRRVFPN ARHQFCNWHL  300
GKNVVSNVHI SGFAHAFKQC MDMEMDETKF EHGLTTMVEK FGLQTNSWVL ETYEKCHMWA  360
KAYMREHFFA GMKSTQRSEC LNAYFNPFLQ HKLKLYEFVR HYDRALARIR YNEAGDDAET  420
NNTFSDRSWI VTHSPTDAAM RCSYMKFESL GLPCCHIICV IKAENLMQIS LTCVLHRWTR  480
AADKDGQQWP QLSIDSTTTQ TARYGILSSS YNEMCFYASQ STEGFKEARD ACLPMTSRMN  540
ELYERNLNNG NGDKGKHSFP RQFGVEDPDV VKTKRNPGQA SSNYRRLRKC GNCKCIGHTK  600
RTCPKRLGMH VFR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	9e-70	FAR1 family protein