PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028119579.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 536aa MW: 58050 Da PI: 8.5521 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 16.2 | 2.9e-05 | 94 | 116 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k F r nL+ H r H XP_028119579.1 94 FVCEICKKGFQRDQNLQLHRRGH 116 89*******************88 PP | |||||||
2 | zf-C2H2 | 11.1 | 0.0013 | 170 | 192 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC +C+k + +s+ k H +t+ XP_028119579.1 170 WKCDKCSKKYAVRSDWKAHSKTC 192 58*****************9998 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 536 aa Download sequence |
MKALMIQQQN PGVDENNMSN LTSASGEASV SSGNKDESGT IYPPQQYFAP PPPPQNQTQP 60 ALVVKKKRNL PGNPDPEAEV IALSPKSLLA TNRFVCEICK KGFQRDQNLQ LHRRGHNLPW 120 KLKQRTSKEV KKKVYVCPEA SCVHHDPSRA LGDLTGIKKH FCRKHGEKKW KCDKCSKKYA 180 VRSDWKAHSK TCGTREYRCD CGTLFSRRDS FITHRAFCDA LAEESARAIT VNPLLSSTQL 240 STSTSSSHIN LQVQIQPQFN YQDLHDFPMK KEQQSFSLRP DISVPPRLAC PSTVVGAGPG 300 PPPPSSIFPT ILDQEFTHHQ DHQLPVLHEN SNPNPSLGPT TLQPYHETAS SSSPHMSATA 360 LLQKAAQMGA TMSSKANAMM MSMRPHHHQH HQAHVSANSG GGFGLNLSSR EEMAGTATDP 420 GAGAGAPPSF LQDMMMTTSL SSTATGFDGS SFEYSFGDHG GAGGVGMLNP NKDGTISKAS 480 GGGNGGHGGG GNDGMTRDFL GLRPLSHDDI LNIAGFTNHI DSPMGNQNQT QESWRS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G13810.1 | 1e-103 | C2H2 family protein |