PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028119527.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 204aa MW: 23755.7 Da PI: 7.1156 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 67.6 | 1.2e-21 | 10 | 58 | 2 | 50 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeys 50 +i++k +rq+tfskRr+g++KKA+ELSvLCd++va+ +f s + y +s XP_028119527.1 10 PIQDKHKRQITFSKRRQGLMKKAQELSVLCDVDVALAVFTSGCRAYKFS 58 699************************************9988888776 PP | |||||||
2 | K-box | 35.6 | 4e-13 | 78 | 171 | 5 | 99 |
K-box 5 sgksleeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 sg+ ++++ e+ qqe + ++++ L + qR + + +e+L++ L +Le+ L+ l + Rs+K++l++e++ l +ke++l+ee+k ++++++ XP_028119527.1 78 SGN-SNDHQPEKHQQECRTPCENNNILPSVQRFFESQAVEQLDISLLSRLEHFLDAKLAQTRSRKTQLMMESLAALHEKERRLREEEKLISEMIN 171 444.57778999***************************************************************************99998876 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 204 aa Download sequence |
MGRRRVELRP IQDKHKRQIT FSKRRQGLMK KAQELSVLCD VDVALAVFTS GCRAYKFSGG 60 NSFNTILERY RTHVEANSGN SNDHQPEKHQ QECRTPCENN NILPSVQRFF ESQAVEQLDI 120 SLLSRLEHFL DAKLAQTRSR KTQLMMESLA ALHEKERRLR EEEKLISEMI NEMQTEGMIN 180 GEDNQEPTVE LYNQWANNNN YPSD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30260.1 | 6e-34 | MIKC_MADS family protein |