PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028119452.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family NF-YA
Protein Properties Length: 321aa    MW: 34997.5 Da    PI: 9.7147
Description NF-YA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028119452.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1CBFB_NFYA94.51.3e-29152208158
       CBFB_NFYA   1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 
                     d p+YVNaKQy++I++RR +Rak+e+++kl  ++rkpylh SRh hA+rRpRg+gGrF
  XP_028119452.1 152 DGPIYVNAKQYHGIIRRRLSRAKAESKNKL-LRARKPYLHLSRHLHAKRRPRGCGGRF 208
                     57****************************.9*************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 321 aa     Download sequence    
MTMHTVYLKE HEGIVQNPTG QLSSGAVPWW GGIGSQSAYA ESFGQFKSSS MEHPTSGGQP  60
TSTKHAEHAT ELGLEKGNTT QFAIFPGDCK NSANMPMKSA PSEYRGCIEL GFGQPVICAK  120
YPYGDQCYGL FSTYGAQIPG RIMLPLNLTT DDGPIYVNAK QYHGIIRRRL SRAKAESKNK  180
LLRARKPYLH LSRHLHAKRR PRGCGGRFLN TKTSNGDKGG TETEKPQHGR LCQPAESQDS  240
EVLQSDSGNL KSPKRANGKR SNLSGSEVTS MFSRGDLNLF AFNHTLPSVH SLSDVMNTGH  300
GMSIPSSKWI AAADNCCHLK V
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06510.21e-59NF-YA family protein