PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028119435.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 336aa MW: 37640.1 Da PI: 5.3655 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 92.8 | 2.6e-29 | 120 | 181 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 ldDgynWrKYGqK++ g+++pr+YYrCt++ gC ++k+++rs+edp++ eitY+g+H+++ XP_028119435.1 120 LDDGYNWRKYGQKDILGAKYPRGYYRCTHRnvqGCLATKQIQRSDEDPTLYEITYRGRHTCT 181 59***************************98999**************************96 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 336 aa Download sequence |
MENSADWEQK NLINELTQGM ELAKQLQIHL NVTTSPHDTR ELLVHKILNS YDKALSMLKL 60 NGETQPTAAA MGMAESPHSE DSDKDFKDHE HKHVSKKRKS MVRWTKQVQV CPGPGLEGCL 120 DDGYNWRKYG QKDILGAKYP RGYYRCTHRN VQGCLATKQI QRSDEDPTLY EITYRGRHTC 180 TLITAPSAAA ALPDKQEQPN MSQQNYQQQS CEIQFNFQTE LDSSTRDQSI PSLYLPCSVS 240 NVMVKNYVDS ASMVDNNFVG NLYHPLLVSP STSAATQMGG FVGDWNQTVM ASESEQLMEI 300 VSAASATNSS TVGLDFPFGA LDLFDPTFSF ENPPFF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24110.1 | 2e-52 | WRKY family protein |