PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028119289.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 176aa MW: 19389.3 Da PI: 6.5106 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 15.1 | 6.8e-05 | 32 | 54 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 y+C+ C++ Fs+ L H++ H XP_028119289.1 32 YTCTFCKRGFSNAQALGGHMNIH 54 9********************99 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 176 aa Download sequence |
MEFNQSSIKK SDPVVLKSSD DHNQFSSHVR SYTCTFCKRG FSNAQALGGH MNIHRRDRAK 60 LKESSSGDQS LLSFDTTKKS PSDDHDSSES NEEKVFSPKR SSLVLCKGGD GVGELQNLFV 120 ETPSSKNDVE ASIQVSEQVE KSKQLGRGSS HGELDLELRL GLEHHETTKT GTGELF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G53820.1 | 4e-17 | C2H2 family protein |