PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119211.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 517aa MW: 55987.7 Da PI: 8.5875

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119211.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	97.1	1.2e-30	263	321	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_028119211.1 263 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAiGCPVRKQVQRCAEDRTILITTYEGTHNHP 321 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 517 aa Download sequence
MDKGWGLTLD SADPISFFTN KPANVLRGSM FPGIGLPVNL NRREEQAAPS PSHENRVVVR 60 ETGLHLSDRP TIQDVILSAA KDKRAKNELG LLQVELEQMN AENQRLRGML SQVSHNYSTL 120 QMQLMTLMQH QQQQGSTMIV EEDKKHHEAG GPVVPRQFMD LGPNAATETD EPSRSSSEER 180 TPSGSGSPPN HKNETVPFDQ NKSNYRDGKA IRREESPESE SWVSNKVPKL MNTTNKSVEQ 240 ASEATMRKAR VSVRARSEAP MITDGCQWRK YGQKMAKGNP CPRAYYRCTM AIGCPVRKQV 300 QRCAEDRTIL ITTYEGTHNH PLPPAAMAMA STTSSAATML LSGSMSSGDG LMNMNPNFLA 360 RAILPCSSSM ATISASAPFP TVTLDLTNTP NPLQTQRTPT QFQVPLASGF TRPVPHVFGQ 420 ALHNQSKFSG LQLSQDMDSV QAPQNTSFSD TLSAATAAIT ADPNFTAALA AAISSIIGGA 480 QPNNNHANNT TTSTSTTTNT NNTTTSNSNK IGSFPGN

Sequence ? help Back to Top

Protein Sequence Length: 517 aa Download sequence

MDKGWGLTLD SADPISFFTN KPANVLRGSM FPGIGLPVNL NRREEQAAPS PSHENRVVVR  60
ETGLHLSDRP TIQDVILSAA KDKRAKNELG LLQVELEQMN AENQRLRGML SQVSHNYSTL  120
QMQLMTLMQH QQQQGSTMIV EEDKKHHEAG GPVVPRQFMD LGPNAATETD EPSRSSSEER  180
TPSGSGSPPN HKNETVPFDQ NKSNYRDGKA IRREESPESE SWVSNKVPKL MNTTNKSVEQ  240
ASEATMRKAR VSVRARSEAP MITDGCQWRK YGQKMAKGNP CPRAYYRCTM AIGCPVRKQV  300
QRCAEDRTIL ITTYEGTHNH PLPPAAMAMA STTSSAATML LSGSMSSGDG LMNMNPNFLA  360
RAILPCSSSM ATISASAPFP TVTLDLTNTP NPLQTQRTPT QFQVPLASGF TRPVPHVFGQ  420
ALHNQSKFSG LQLSQDMDSV QAPQNTSFSD TLSAATAAIT ADPNFTAALA AAISSIIGGA  480
QPNNNHANNT TTSTSTTTNT NNTTTSNSNK IGSFPGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-110	WRKY family protein