PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028119210.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 559aa MW: 60702.6 Da PI: 8.162

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028119210.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	96.9	1.3e-30	305	363	2	59
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 Dg++WrKYGqK+ kg+++pr+YYrCt+a gCpv+k+v+r+aed +++++tYeg+Hnh+ XP_028119210.1 305 TDGCQWRKYGQKMAKGNPCPRAYYRCTMAiGCPVRKQVQRCAEDRTILITTYEGTHNHP 363 7*********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 559 aa Download sequence
MDKGWGLTLD SADPISFFTN KPANVLRGSM FPGIGLPVNL NRREEQAAPS PSHENRVVVR 60 EVDFFSDKNN SNHQMDSKTS VNTNSIKKEN SDQAPSRADF DVNTGLHLSD RPTIQDVILS 120 AAKDKRAKNE LGLLQVELEQ MNAENQRLRG MLSQVSHNYS TLQMQLMTLM QHQQQQGSTM 180 IVEEDKKHHE AGGPVVPRQF MDLGPNAATE TDEPSRSSSE ERTPSGSGSP PNHKNETVPF 240 DQNKSNYRDG KAIRREESPE SESWVSNKVP KLMNTTNKSV EQASEATMRK ARVSVRARSE 300 APMITDGCQW RKYGQKMAKG NPCPRAYYRC TMAIGCPVRK QVQRCAEDRT ILITTYEGTH 360 NHPLPPAAMA MASTTSSAAT MLLSGSMSSG DGLMNMNPNF LARAILPCSS SMATISASAP 420 FPTVTLDLTN TPNPLQTQRT PTQFQVPLAS GFTRPVPHVF GQALHNQSKF SGLQLSQDMD 480 SVQAPQNTSF SDTLSAATAA ITADPNFTAA LAAAISSIIG GAQPNNNHAN NTTTSTSTTT 540 NTNNTTTSNS NKIGSFPGN

Sequence ? help Back to Top

Protein Sequence Length: 559 aa Download sequence

MDKGWGLTLD SADPISFFTN KPANVLRGSM FPGIGLPVNL NRREEQAAPS PSHENRVVVR  60
EVDFFSDKNN SNHQMDSKTS VNTNSIKKEN SDQAPSRADF DVNTGLHLSD RPTIQDVILS  120
AAKDKRAKNE LGLLQVELEQ MNAENQRLRG MLSQVSHNYS TLQMQLMTLM QHQQQQGSTM  180
IVEEDKKHHE AGGPVVPRQF MDLGPNAATE TDEPSRSSSE ERTPSGSGSP PNHKNETVPF  240
DQNKSNYRDG KAIRREESPE SESWVSNKVP KLMNTTNKSV EQASEATMRK ARVSVRARSE  300
APMITDGCQW RKYGQKMAKG NPCPRAYYRC TMAIGCPVRK QVQRCAEDRT ILITTYEGTH  360
NHPLPPAAMA MASTTSSAAT MLLSGSMSSG DGLMNMNPNF LARAILPCSS SMATISASAP  420
FPTVTLDLTN TPNPLQTQRT PTQFQVPLAS GFTRPVPHVF GQALHNQSKF SGLQLSQDMD  480
SVQAPQNTSF SDTLSAATAA ITADPNFTAA LAAAISSIIG GAQPNNNHAN NTTTSTSTTT  540
NTNNTTTSNS NKIGSFPGN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G62300.1	1e-116	WRKY family protein