PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028118823.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YB | ||||||||
Protein Properties | Length: 132aa MW: 14716.1 Da PI: 6.7727 | ||||||||
Description | NF-YB family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YB | 109.8 | 1.7e-34 | 46 | 124 | 2 | 96 |
NF-YB 2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelege 96 reqdrflPianvsrimkk+lP nakis +ketvqec+sefisf+t gddllwa++tlGfe+yveplkvyl ++r++eg+ XP_028118823.1 46 REQDRFLPIANVSRIMKKALPVNAKISTSTKETVQECISEFISFIT----------------GDDLLWAMTTLGFEEYVEPLKVYLLRFRDMEGK 124 89******************************************87................79****************************985 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 132 aa Download sequence |
MDSKVPHPIP TPKLTHLTPL LPPPPPPPES DPSGGHNNSN SKLSPREQDR FLPIANVSRI 60 MKKALPVNAK ISTSTKETVQ ECISEFISFI TGDDLLWAMT TLGFEEYVEP LKVYLLRFRD 120 MEGKICCVLF GN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G14540.1 | 3e-46 | NF-YB family protein |