PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028118478.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HB-PHD
Protein Properties Length: 1483aa    MW: 162995 Da    PI: 4.6582
Description HB-PHD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028118478.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Homeobox37.83.2e-1213131360956
                      HHHHHHHHHHHHHSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHHHH CS
        Homeobox    9 keqleeLeelFeknrypsaeereeLAkklgLterqVkvWFqNrRakek 56  
                      +  ++ L ++F++n+yp+++++e L k+lg+t  qV+ WF N R  ++
  XP_028118478.1 1313 EAVTQGLLRAFKENQYPDRTAKENLGKELGITAHQVSKWFENARWSYR 1360
                      56788999************************************9887 PP

2PHD383.8e-13939994151
                     SBTTTSS..TCTTSSEEEBSS.SSSEEETTTSTSSSSHHSHHSS..TBSSHHHHTT CS
             PHD   1 rCkvCgk..sdeegelvlCdg.CkewfHlkClglkleseekpeg..ewlCeeCkek 51 
                     +C+ Cg+    ++++++lCdg C++ fH+ Cl+++l +e++p +   wlC+ C++k
  XP_028118478.1 939 FCAKCGSkdLGADNDIILCDGaCERGFHQFCLEPPLLKEDIPPDdkGWLCPGCDCK 994
                     699***976667********66*******************99999*******985 PP

Sequence ? help Back to Top
Protein Sequence    Length: 1483 aa     Download sequence    
MSADMNMDAS SAQDNSETGQ GSPPIQRTSI QEHEFGARSL ASEATEEKHV ISTGNVNMVS  60
TEARPAECNY NGIERLRQPH EDLTRNLSCE QLGQPLEDAT MNSNSEQFGL LPDHVAGKNL  120
SALRAMSEIN YELVTENVNS EALVETQKMG IGHIQNGPAE TGTVEFDHLG LEQSILPSKD  180
VTKNSSWDQL RPTPEDERKS SLEQLGLPPK DAAVNTSLEQ LKPPPDHAAG KKSSAAQARS  240
EINHELIPEN VNSEALVETK KICTGRIQNV PVETETVELD HLGLEQSSLP SEDVTKNSSW  300
DQLRPSPQDG RNSSLEQLGL PPKDAAVNTS PEQLKSPPDH AAGKILSARQ TMPEINHEEV  360
PENVNSEALV ETQNIGTGCI QNGPAETEMV EFDHLGLELC GLPSEDVTEN SSRDQLRPPP  420
EDKRKSTLEQ SELVPENVDS EALVETQKIG TGCIQNGPAE TGMAEFNHLG LELSGLTSEN  480
VTENSSGDQL RLPPEDERKS TLEQSGLPPK DTAVNTSLEE LKTPPDNTAG KILNAKQAMP  540
EINHVLVPEN VNSEALVVTQ KVGTGHIQGE PTETGMVEFD HLGLELSDLP SEDMTRSSSW  600
EQLCPSPEDK RKSSMEQLGL PPEDAAVNAN LEQLKPLPDH AAGKILSAKQ AMPEINHVLV  660
PENENIEALV VTRKVCTGHI QNGPTETGRV EFNHLGLQQS GLPSEDVTKS SSSEQLRPPL  720
EDEKNSSMEQ LGLPPEDAAV NTSLEQLEPL PDNVSNNCDL KQLEKQPEDA ANNASKLGGR  780
GRRKSTKSTK HEPGSSVMST RVLRSRLQEK HKAPEPSNNL PEHVDGANQE KRRKMRKKKN  840
MKKIPVDEVS RIRKHLRYLL NRINYEQNLI DAYSGEGWKG QSLEKIKPEK ELQRAKSEIF  900
RCKLKIRDLF QRLDLLIAEG RLPESLFDSE GQIDSEDIFC AKCGSKDLGA DNDIILCDGA  960
CERGFHQFCL EPPLLKEDIP PDDKGWLCPG CDCKVDCIDL LNDSQGTVLS VLDTWEKVFP  1020
EAAAAAAAGN KLDSVGLPSD DSDDNDYDPD GSEVDEEVEG DESSSDESDS YSASEDNRDS  1080
PKNKQKLELP SDDSEDDDYD PDAPDLSDQV KQESSSSDFT SDSEDFSVAF DDNISPCKDE  1140
PVPGELMSAS SDQNKPCGVS NGERSKVGRR KKQSLDDELP YLLESGPGQG ESAPLSGKRH  1200
VERLDYKRLH DETYGNVSSD SSDENWMDAS DVPTKRRKNN TGKVASASPC GRTPIIEGKH  1260
NQEESERTPK RRACKKLDVE GINDSPAKSY KGSSEPGSSY SGSKRTPYKR LGEAVTQGLL  1320
RAFKENQYPD RTAKENLGKE LGITAHQVSK WFENARWSYR HTSRMASSLE SVPMSEPEPK  1380
MVREDDAGNG VKNKEPSKVD AGLAYTTPRG HKRISQSEHQ ASSDHMLSIE ETQNPSAPVD  1440
LPKSQEVRKR SRPPKARVQK RGRPLRSQEV RKRGRPKRKK SAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19510.19e-92HB-PHD family protein