PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028118286.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 314aa    MW: 35533 Da    PI: 5.4584
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028118286.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B358.89.6e-19108209199
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS.SE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgr.se 89 
                     f+k+l +sdv++++r+++pkk ae++   +k++e + +++ d +g   W++k++y  +++s++yvl+ ++ eFv+ +gLk+gD ++++  ++ ++
  XP_028118286.1 108 FQKELQTSDVGSLRRMIVPKKAAEDYlpILKEKEAFVISMDDMDGlHAWSFKFRYwpNNSSRMYVLE-NTGEFVNTHGLKQGDYMMLY--QDyEN 199
                     99**************************66777899******999999*****99888899999999.********************..67799 PP

                     E..EEEEE-S CS
              B3  90 felvvkvfrk 99 
                     +++v++++++
  XP_028118286.1 200 RNYVIRARKA 209
                     9999998875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 314 aa     Download sequence    
MGKNEAYGLV AGGGVGTRVT STTSVATKGD RVRKTRVNDE SDRTELALNL VSATSLGVLR  60
KKRMPRQRRS SINLLPFLSL SSHVPPPPPL PLHPPARAID RTRLRFLFQK ELQTSDVGSL  120
RRMIVPKKAA EDYLPILKEK EAFVISMDDM DGLHAWSFKF RYWPNNSSRM YVLENTGEFV  180
NTHGLKQGDY MMLYQDYENR NYVIRARKAS DQDLYSESAT NAVNVYFADD FEVNDSGLVP  240
PVNFPTVDDT GMPFVYETTF SSDSESSYVY ETTSSNDSLF DFWNGPMTYH PKVEPIGSFE  300
SIENLSLEEL LLSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.18e-56B3 family protein