PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028118168.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 350aa    MW: 38857.3 Da    PI: 5.1539
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028118168.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2591.1e-1894144155
             AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     + y+GVr++  +g+WvAeIr+p   + r  r +lg+f ta +Aa a+++a+k+++g
  XP_028118168.1  94 CNYRGVRQRT-WGKWVAEIREP---N-RgSRLWLGTFPTARQAAMAYDEAAKAMYG 144
                     56*****999.**********8...3.35************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 350 aa     Download sequence    
MIAQNIEFQR NTMMGLLDQA SNLTSLPLDY SRKRKSRSRR NGSKSVSQTL AKWKEYNDKL  60
DSSDEGAKPV RKVPAKGSKK GCMKGKGGPE NSHCNYRGVR QRTWGKWVAE IREPNRGSRL  120
WLGTFPTARQ AAMAYDEAAK AMYGPCARLN LPNGVSLSES GKESTSLPTT SVSDSTTTSI  180
QSEVCASEDL MVNLDALKVK HEDDNRLSTI CSVSTPMSVV KDKIKEEPVD FNVESELGYG  240
QNYPQNFTFD DEMFDVDELL GALGSTSVHD LGSLGQSLDY NKFNGEMPSD LSYQLQNPDA  300
KLLGSLHHME QVPSAVDYGF DFLRPGRQED HNFALDDFGY LDLDYSDLGL
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13136SRKRKS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.13e-40ERF family protein