PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028118118.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YC | ||||||||
Protein Properties | Length: 118aa MW: 12861.9 Da PI: 9.7118 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 107.1 | 1.1e-33 | 22 | 103 | 18 | 98 |
NF-YC 18 nhelPlarikkilk.adedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdflvdivpr 98 h+lPlarikki+k + +dvkmis eaP+++skacelfi el+ rsw+ a ++k+rtl+k d+a+av tdifdfl++ v XP_028118118.1 22 THSLPLARIKKIMKkSGNDVKMISGEAPIVFSKACELFIEELAKRSWMMAIQSKKRTLQKEDVASAVIATDIFDFLLNLVSD 103 699**********72569**********************************************************998865 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 118 aa Download sequence |
MRQAGTYSGI LSGRGISGRT GTHSLPLARI KKIMKKSGND VKMISGEAPI VFSKACELFI 60 EELAKRSWMM AIQSKKRTLQ KEDVASAVIA TDIFDFLLNL VSDSANSDDN PGILDTKE |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G48590.1 | 3e-32 | NF-YC family protein |