PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028118074.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 340aa    MW: 38809.4 Da    PI: 4.8089
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028118074.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind115.14.3e-36331252103
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y+++ed++++++isws+ +nsfvv+d++ f+ ++Lp+yFkh nf+SFvRQLn+YgFkkv+ ++         weF+++ F +g+k+ll++
  XP_028118074.1  33 FLSKTYDLVEDPNTNHVISWSKGNNSFVVWDHRAFSMNLLPRYFKHCNFSSFVRQLNTYGFKKVDPDR---------WEFANEGFLRGQKHLLRN 118
                     9****************************************************************999.........****************** PP

                     XXXXXXX CS
    HSF_DNA-bind  97 ikrkkse 103
                     i+r+k++
  XP_028118074.1 119 IRRRKTS 125
                     ****986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 340 aa     Download sequence    
MNPPGLSSSY PGEPSTVVPR PMEGLHGTGP PPFLSKTYDL VEDPNTNHVI SWSKGNNSFV  60
VWDHRAFSMN LLPRYFKHCN FSSFVRQLNT YGFKKVDPDR WEFANEGFLR GQKHLLRNIR  120
RRKTSSHSQT SRGQGLEPCV EVGTFGLDIE VDRLRRDKQV LMAELVKLRQ QQQNTRAYLE  180
AMEERLIGTE TKQQQMIGFL AKAMQNPSFM QQLMQKERRK ELEEAICRKR RRSIDQGPVN  240
VDVGVCEKGL DIKQENQDYD ISGFSDLELE QLAGDIQGLS GSSQNVEEEH VGNEEMQERG  300
DKGVDEGFWE DLLNEGIEEE DEENVDVLAE QLGFLGSSPN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1218232RRKELEEAICRKRRR
2228232RKRRR
3228233RKRRRS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G22830.11e-119HSF family protein