PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028117971.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 318aa MW: 34588.4 Da PI: 6.6296 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58 | 2.4e-18 | 29 | 77 | 3 | 55 |
AP2 3 ykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 + GVr+++ +gr++AeIrdp++ + r++lg+f+taeeAa a+++a+++++g XP_028117971.1 29 FLGVRRRP-WGRYAAEIRDPTT---KERHWLGTFDTAEEAALAYDRAARSKRG 77 67******.**********965...5************************998 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 318 aa Download sequence |
MSSKSKKKQT QTQQQETITG GGEGGGNRFL GVRRRPWGRY AAEIRDPTTK ERHWLGTFDT 60 AEEAALAYDR AARSKRGSRS RTNFVYSNMP PGSSVTSIIS PDEPIIPILN PPLYPLAVAD 120 FSSFHVPPPP PPPRPQQQDP SSIQLLFFPQ NSTPEIQCHF SGGMSAGGGD AWASSRSGVV 180 YHHHQQQQHQ NQQPILGYGS GSGSGGGGLS HQFHDGPSKE LPPLPPQISV SHMADSGYGV 240 WSDPPPPTTL LGFPEQTTIT YPEEIGSYLG FDSNQYVHSP LFGQMPPASD TDAFEHLDLG 300 GSTYFLLIQL HTHIAFSM |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G13910.1 | 1e-25 | ERF family protein |