PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028117834.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 331aa    MW: 37046.7 Da    PI: 8.577
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028117834.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY88.65.3e-28149212259
                     --SS-EEEEEEE--TT-SS-E......EEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefpr......sYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                     +Dgy+WrKYGqK vk+s+fpr      +YYrCt+ +C+vkk+vers +dp++v++tYeg+H+h+
  XP_028117834.1 149 EDGYRWRKYGQKAVKNSPFPRvlrwcrGYYRCTTVTCNVKKRVERSFSDPTIVVTTYEGKHTHP 212
                     8******************964444448***********************************8 PP
Sequence ? help Back to Top
Protein Sequence    Length: 331 aa     Download sequence    
MESKEAVKTE DSIRSSPFLD QFSVVGMLEL GEKSSSSLGF MELLGIPDFN PSIFDILQAS  60
TTPYVEPTRS TSEVLMMNNQ PTTPNSSSIS SESSVAPNDE QSRVVVDEED EEHLKTKKQL  120
LKPKKTSQKK REREPRFAFM TKSEVDHLED GYRWRKYGQK AVKNSPFPRV LRWCRGYYRC  180
TTVTCNVKKR VERSFSDPTI VVTTYEGKHT HPSPLVHRPT TISTSTSAAF IPARPGFSAP  240
SANTNSNTAF ALSLCRRHHH HPFQFISNNN LPPPHLNCGY LSNYLNPTSA STNASVLLHE  300
RRFCNPASSA LLADHGLLQD IVPSSLVTKD D
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G47260.12e-46WRKY family protein