PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028117815.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 275aa    MW: 31056.9 Da    PI: 4.4842
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028117815.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY96.51.7e-3053111259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++pr+YYrC+++ gC++kk+vers++d ++++itY+++Hnh+
  XP_028117815.1  53 SDCWSWRKYGQKPIKGSPYPRGYYRCSTSkGCSAKKQVERSRTDASMLIITYTSSHNHP 111
                     699***********************9988****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    
MDGSHSEGLD SKITEELKPE TQASKRRKVV QKTVVTVKIE ANEGKQRSEG PPSDCWSWRK  60
YGQKPIKGSP YPRGYYRCST SKGCSAKKQV ERSRTDASML IITYTSSHNH PGPVLPTTNN  120
LTVTTTEHSK LEPPTEDQPT TTTPQKEDLE QEAQDQDQQP LINSEEDANE DHFHYSQSPF  180
NNSQENPFAE NLENTTTYEA PSVVLFEEEP LSCYNPPLPP PLMAFSAIDK SEEEYDFYDE  240
LEELPSSSSS SSSSSFFTSF LRNNFFDERI LVHPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G34830.16e-34WRKY family protein