PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028117498.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

ERF

Protein Properties

Length: 419aa MW: 47112.2 Da PI: 4.3416

Description

ERF family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028117498.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	AP2	54.5	2.9e-17	106	155	1	54
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkle 54 s ykGVr++k +g+++AeIrdp +r kr++lg++ taeeA a+++ ++++e XP_028117498.1 106 SLYKGVRRRK-WGKYAAEIRDP----IRgKRIWLGTYNTAEEASNAYEKKKLEFE 155 57***998.******7....246******************999876 PP

Sequence ? help Back to Top
Protein Sequence Length: 419 aa Download sequence
MPVVQRKLLN HNKKIEEKTG KDYKKPIRKV RIIYSDPYAT DSGSDDDESI YDNKNGLVRV 60 KRIVREIVVS EEPNKLNAAN SLQHCNERRI VGSKLGEKQK IRRSSSLYKG VRRRKWGKYA 120 AEIRDPIRGK RIWLGTYNTA EEASNAYEKK KLEFESILLS ERNKNLNSCV ASPICHPCVS 180 EETNGLYSHP SPSSVLDIST TSIVNGSGNF NKDEGGSLKF VDAPAYSIKE EEANTIQIAK 240 GEQPISAFLE DQFVSPSIDQ DFDLGFEENL LPTNDLEQKP NLEILQDPSV SPSMSRELDL 300 AFENNSPYDD DQSVSPLICQ DFNLGFEDLE QPPPISEFLQ EPSVSPSING DLNSAFENNS 360 LYGNDLGQFF NSLDNVDMDM DFPVCEFQNG EGNDLPNYDF DLGNDELAWI DEALNITCP

Sequence ? help Back to Top

Protein Sequence Length: 419 aa Download sequence

MPVVQRKLLN HNKKIEEKTG KDYKKPIRKV RIIYSDPYAT DSGSDDDESI YDNKNGLVRV  60
KRIVREIVVS EEPNKLNAAN SLQHCNERRI VGSKLGEKQK IRRSSSLYKG VRRRKWGKYA  120
AEIRDPIRGK RIWLGTYNTA EEASNAYEKK KLEFESILLS ERNKNLNSCV ASPICHPCVS  180
EETNGLYSHP SPSSVLDIST TSIVNGSGNF NKDEGGSLKF VDAPAYSIKE EEANTIQIAK  240
GEQPISAFLE DQFVSPSIDQ DFDLGFEENL LPTNDLEQKP NLEILQDPSV SPSMSRELDL  300
AFENNSPYDD DQSVSPLICQ DFNLGFEDLE QPPPISEFLQ EPSVSPSING DLNSAFENNS  360
LYGNDLGQFF NSLDNVDMDM DFPVCEFQNG EGNDLPNYDF DLGNDELAWI DEALNITCP

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	109	115	KGVRRRK

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G68550.1	5e-22	ERF family protein