PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028117349.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family MIKC_MADS
Protein Properties Length: 203aa    MW: 23350.8 Da    PI: 8.6325
Description MIKC_MADS family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028117349.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SRF-TF94.93.5e-301059251
                    ---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS
          SRF-TF  2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51
                    rien + rqvtfskRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s
  XP_028117349.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFAS 59
                    8***********************************************86 PP

2K-box738.4e-2578158584
           K-box   5 sgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkke 84 
                     s+++ l e+++++l++e+a + k+ie L+  +R+llGe+L+s++++eLqq+eqqLe+s++++R++K++++ e+i +l++k 
  XP_028117349.1  78 SNNAlLVEHNMQHLKNEAADMSKKIEHLEAAKRKLLGECLGSCTIEELQQIEQQLERSVSTVRARKMQVFQEHIAQLKEKY 158
                     455578899*********************************************************************995 PP

Sequence ? help Back to Top
Protein Sequence    Length: 203 aa     Download sequence    
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIVFSP RGKLYEFASS  60
SMQETVQRYQ RHTKDVQSNN ALLVEHNMQH LKNEAADMSK KIEHLEAAKR KLLGECLGSC  120
TIEELQQIEQ QLERSVSTVR ARKMQVFQEH IAQLKEKYGL DLQQESNEDM EIVACTKTTE  180
NLDVETELFI GPPDARIKRA LQK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G45660.11e-73MIKC_MADS family protein