PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028117348.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 217aa MW: 24863.6 Da PI: 8.2174 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 94.8 | 4e-30 | 10 | 59 | 2 | 51 |
---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 2 rienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 rien + rqvtfskRrng+lKKA+ELSvLCdaeva+i+fs++gklye++s XP_028117348.1 10 RIENATSRQVTFSKRRNGLLKKAFELSVLCDAEVALIVFSPRGKLYEFAS 59 8***********************************************86 PP | |||||||
2 | K-box | 82.5 | 9.8e-28 | 78 | 171 | 5 | 97 |
K-box 5 sgks.leeakaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkk 97 s+++ l e+++++l++e+a + k+ie L+ +R+llGe+L+s++++eLqq+eqqLe+s++++R++K++++ e+i +l++kek l en L +k XP_028117348.1 78 SNNAlLVEHNMQHLKNEAADMSKKIEHLEAAKRKLLGECLGSCTIEELQQIEQQLERSVSTVRARKMQVFQEHIAQLKEKEKILAAENAVLCEK 171 445578899*******************************************************************************999877 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MVRGKTQMRR IENATSRQVT FSKRRNGLLK KAFELSVLCD AEVALIVFSP RGKLYEFASS 60 SMQETVQRYQ RHTKDVQSNN ALLVEHNMQH LKNEAADMSK KIEHLEAAKR KLLGECLGSC 120 TIEELQQIEQ QLERSVSTVR ARKMQVFQEH IAQLKEKEKI LAAENAVLCE KYGLDLQQES 180 NEDMEIVACT KTTENLDVET ELFIGPPDAR IKRALQK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G45660.1 | 1e-82 | MIKC_MADS family protein |