PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028117015.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

WRKY

Protein Properties

Length: 735aa MW: 79548.8 Da PI: 6.3654

Description

WRKY family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028117015.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	WRKY	101.4	5.2e-32	309	366	2	60
--SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS-- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhek 60 +DgynWrKYGqK+vkgse+prsYY+Ct+++Cpvkkkvers+ +++++ei+Y+g H h+k XP_028117015.1 309 EDGYNWRKYGQKQVKGSEYPRSYYKCTHPNCPVKKKVERSH-EGHITEIIYKGAHSHPK 366 7**************************************.*************85 PP
2	WRKY	103.7	1e-32	521	579	1	59
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK+vkg+++prsYY+CtsagC+v+k+ver+++d k v++tYeg+Hnh+ XP_028117015.1 521 LDDGYRWRKYGQKVVKGNPNPRSYYKCTSAGCTVRKHVERASHDLKSVITTYEGKHNHD 579 59********************************************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 735 aa Download sequence
MGGFDDHVAI MGDWVPPSPS PRGFFSSVLG DEISSRSISE NPFENKNGVL FPGPEERIMS 60 GRSDEKDGAQ DCVADDQLTK SNSFSEQKMN SRGGGLLERM AARAGFNAPR LNTESIRPAD 120 LSLNPDVRSP YLTIPPGLSP TSLLESPVFL SNSLAQPSPT TGKFAFPPSG NGRNSTLATE 180 ATDKSRDNFF EDINTSSFAF KPVAESSPSL FLGTTSQMAS TFPQTNFPGI EVSVQPKNSL 240 QSRYVEPAKL QSQNGTTLNR QDSYRTCSEK EAAVGGASAE NSPPFDELQD EEAHQRGGGD 300 TVVGGAPSED GYNWRKYGQK QVKGSEYPRS YYKCTHPNCP VKKKVERSHE GHITEIIYKG 360 AHSHPKPPLN RRSTIGSSNL LTDMQLDIGD QTGAQIGADG EPVWSTVQKG VPDWRHDNLE 420 VTSSASVGAE YCNAPNSMQG QNCTHVETGD AVDVSSTFSN EEDEDDRGTH GSISLGCDGE 480 GDESESKRRK IEAYATEMSG ATRAIREPRV VVQTTSEVDI LDDGYRWRKY GQKVVKGNPN 540 PRSYYKCTSA GCTVRKHVER ASHDLKSVIT TYEGKHNHDV PAARNSSHAN SGTTNNGPNQ 600 TAGTSASASV ASHLHRPEPS QVHNSMARYD RPPSMSSFGL PGRQQLGPPH GFTFGMNQPG 660 LANLAMAGLG SNQGKLPGMP VHQYFGQQRP LSEMGFMLPK GEPKMEPLSE PPLNLSNGAS 720 VYHQIMNRLP LGPHM

Sequence ? help Back to Top

Protein Sequence Length: 735 aa Download sequence

MGGFDDHVAI MGDWVPPSPS PRGFFSSVLG DEISSRSISE NPFENKNGVL FPGPEERIMS  60
GRSDEKDGAQ DCVADDQLTK SNSFSEQKMN SRGGGLLERM AARAGFNAPR LNTESIRPAD  120
LSLNPDVRSP YLTIPPGLSP TSLLESPVFL SNSLAQPSPT TGKFAFPPSG NGRNSTLATE  180
ATDKSRDNFF EDINTSSFAF KPVAESSPSL FLGTTSQMAS TFPQTNFPGI EVSVQPKNSL  240
QSRYVEPAKL QSQNGTTLNR QDSYRTCSEK EAAVGGASAE NSPPFDELQD EEAHQRGGGD  300
TVVGGAPSED GYNWRKYGQK QVKGSEYPRS YYKCTHPNCP VKKKVERSHE GHITEIIYKG  360
AHSHPKPPLN RRSTIGSSNL LTDMQLDIGD QTGAQIGADG EPVWSTVQKG VPDWRHDNLE  420
VTSSASVGAE YCNAPNSMQG QNCTHVETGD AVDVSSTFSN EEDEDDRGTH GSISLGCDGE  480
GDESESKRRK IEAYATEMSG ATRAIREPRV VVQTTSEVDI LDDGYRWRKY GQKVVKGNPN  540
PRSYYKCTSA GCTVRKHVER ASHDLKSVIT TYEGKHNHDV PAARNSSHAN SGTTNNGPNQ  600
TAGTSASASV ASHLHRPEPS QVHNSMARYD RPPSMSSFGL PGRQQLGPPH GFTFGMNQPG  660
LANLAMAGLG SNQGKLPGMP VHQYFGQQRP LSEMGFMLPK GEPKMEPLSE PPLNLSNGAS  720
VYHQIMNRLP LGPHM

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G56270.1	0.0	WRKY family protein