PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028116966.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 297aa    MW: 33953.6 Da    PI: 6.0001
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028116966.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR158.13e-1837123291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     fY +YAk+vGFs+  +++    ++ge       Cs++gkr ++++   +  +++ +t+++Cka+++ +++kdg++++t+++leHnH+l p
  XP_028116966.1  37 FYAKYAKHVGFSIACKTQVIG-DDGELRYFGIECSRSGKRIKKSEV--NPLKPSLSTKIDCKARVRASLQKDGRFMLTTVNLEHNHDLIP 123
                     9*************9988776.8999**************998766..999************************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MEIDSNIVEN PLLNESEEVE EPKRGMCFTS KQEAYTFYAK YAKHVGFSIA CKTQVIGDDG  60
ELRYFGIECS RSGKRIKKSE VNPLKPSLST KIDCKARVRA SLQKDGRFML TTVNLEHNHD  120
LIPTDSRHFL MNKKILSPVK RRLEINDQAG IGVSRNYNSM VVEAGGYESL TFDERDARNY  180
IERARKLRLG EGDSDALQKY FLRMHAQNSS FYYMIDVDID FRIRNLFWAD AMSRAAYEEF  240
GDSALGFSVS EFFGYLQARW EELAQYEPLI ELPVDVVACV QPPCQPAHLP VSDGLKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G15090.11e-32FAR1 family protein