PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028116893.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family ERF
Protein Properties Length: 351aa    MW: 40144.3 Da    PI: 4.6499
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028116893.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP246.68.4e-1573129355
             AP2   3 ykGVrwdkkrgrWvAeIrd.pseng...kr.krfslgkfgtaeeAakaaiaarkkleg 55 
                     y+GVr++  +g+WvAeIr+  ++ +   k+  r +lg+f    +Aa a+++a+ +++g
  XP_028116893.1  73 YRGVRQRT-WGKWVAEIREpIYDSCqlrKKaNRLWLGTFSASVDAAHAYDEAAMAMYG 129
                     9****999.**********666677986558**********9************9987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 351 aa     Download sequence    
MSSENIDGRL RKRQNGSDSI EERLLMWKNY HSQIQIDSTK EIGLNRRRKG PSKGLKRGCM  60
QGKGGTENPG CMYRGVRQRT WGKWVAEIRE PIYDSCQLRK KANRLWLGTF SASVDAAHAY  120
DEAAMAMYGS AAILNFPNYH KMPLDFCNDQ LYLITEEPKV SQSEHFNSIE VVSPTKSEVE  180
KEKIAEASYS CSVSDYNHKD DGLKDLKELK KETETTNQPF GDISSDDFVF RQDQFGSFDE  240
PLGYQGQLDS LETLLMEDEI EIQSPGPTDT DNNELLSDGH FLNRTQSNLY HLLEKAEQSE  300
YMGNLQLQKY ETQNYEYNYD TITEEMFDFK PSGTSVTHNP GLQQEGNYDT G
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.14e-28ERF family protein