PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028116819.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 250aa MW: 27561.8 Da PI: 6.0874 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 56.7 | 6e-18 | 104 | 154 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 +y+GVr+++ +g+++AeIrd +ng +r++lg++ tae+Aa a++ a+ k++g XP_028116819.1 104 RYRGVRRRP-WGKYAAEIRDRAKNG--ARVWLGTYETAEDAAVAYDIAAYKMRG 154 59*******.**********66665..*************************98 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 250 aa Download sequence |
MCAEDDFDAS FALMKSISRH LLGEFEAPSI NSGDNPTDYC WVNDLFPCII XSKEELPLKE 60 NQSEDIVSLP TPAVATTATV TEISNFSESV ALPETTAVES KGWRYRGVRR RPWGKYAAEI 120 RDRAKNGARV WLGTYETAED AAVAYDIAAY KMRGSRALLN FPLRINSGEP EPVRVTSKRS 180 SPDQSSSSSS ENGCSGKRRR KKVVAKVEPV VVVPPPKLKE VVVGGRESGL ETIQIQFGPN 240 YSTWSMASEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17500.1 | 7e-39 | ERF family protein |