PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028116637.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | C2H2 | ||||||||
Protein Properties | Length: 183aa MW: 20306.9 Da PI: 9.6899 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 19 | 3.9e-06 | 36 | 58 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 ++C++C+k+F+++ +L H++ H XP_028116637.1 36 FVCTYCSKPFPSSQSLGGHQNAH 58 89******************988 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 183 aa Download sequence |
MQLKADSSES STELPKPSLD MGESLSLKHA SNYGSFVCTY CSKPFPSSQS LGGHQNAHQR 60 QRNEEKKQYM KNPLAYRKRA LLRSVKPPLE VVPPSVAQPQ PDHCELTLRL GHGPSRVGAR 120 SGNGFPHKAA AHGNYTYQYF HSYLNHVDWK PKLALDLPTA RELTANGAKE DNNSPSLDLT 180 LKL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06650.1 | 4e-09 | C2H2 family protein |