PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028116379.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 296aa    MW: 34192.5 Da    PI: 7.6048
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028116379.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR168.61.5e-2131119190
            FAR1   1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                     +fYn+Y+ ++GFs+r+ + +k+ + g+it+r fvC+keg+r  +k++   ++++r+e rtgC+a+l +k ++  +k+ v +++++H H ++
  XP_028116379.1  31 NFYNAYGGRMGFSIRRGYVNKN-KGGQITSRLFVCNKEGFRGIDKRD-PLTKNSRQEVRTGCQARLIIKWDRnIHKFFVGEFVEQHYHIFV 119
                     6*******************99.7788*****************999.9999*****************999899*************987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    
MEPNNVENDG GDCDWKPRVH MTFDTEQEAY NFYNAYGGRM GFSIRRGYVN KNKGGQITSR  60
LFVCNKEGFR GIDKRDPLTK NSRQEVRTGC QARLIIKWDR NIHKFFVGEF VEQHYHIFVP  120
TECTHMLPSQ RKISASQVAG IDLAEKSGIR LNAAYELMGN EAGGRESLGF TKVDQKNYLR  180
TKRQKSLAFG EAGSILQYFR EKTLENPSFF YSVQLDSEEQ ITNIFWADAQ MIMDYGQFGD  240
VVTFDTTYKL NSAHRPFASF VGFNHHRETV IFGAALMYDE TADSFIWLFR RFLEAM
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.17e-68FAR1 family protein