PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028116181.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 159aa MW: 17428.6 Da PI: 8.8835 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 58.7 | 1.5e-18 | 60 | 111 | 2 | 56 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng.kr.krfslgkfgtaeeAakaaiaarkklege 56 +y+GVr ++ +g+++AeIrd ++ +r++lg+f taeeAa a+++a+ k++g+ XP_028116181.1 60 HYRGVRCRP-WGKFAAEIRD----SaRHgARVWLGTFETAEEAAMAYDRAAFKMRGA 111 8*****999.**********....33236**************************95 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 159 aa Download sequence |
MAPSHQSELP LNENDSQDMV LCEVLNEANA LISPSFLPPK TQTKATNALQ PNPTIGKKKH 60 YRGVRCRPWG KFAAEIRDSA RHGARVWLGT FETAEEAAMA YDRAAFKMRG ARALLNFPGE 120 MVGQKFDQNL SSQRLDKHGC NSSSGSSSEA SSGMSKPEF |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G47220.1 | 7e-31 | ERF family protein |