PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028115710.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 347aa MW: 39234.9 Da PI: 5.199

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028115710.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	59.7	9.2e-19	92	185	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek....dgkwevtkleleHnHela 90 fYn+YAk GF +rks+ +++ ++g++++r + C +e +r + + +ek+r ++a tr+gCka+++++ + +k++vt+++++HnHela XP_028115710.1 92 FYNAYAKAKGFGIRKSRFNTN-KEGKVVSRLWLCLREDQRLPIYLDgvAEKSRAPKALTRVGCKAQFRIRYDAdageGEKYVVTHFVTDHNHELA 185 ***************9999.666699999*****99888887899999************987667679************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 347 aa Download sequence
MARAEVQREG DDYDIPNEAD DIRLMNESQV EPYYGCEVGS SNEEATNMNV EDGGADVIKE 60 MVDDAHGNDM VGDVECAILE QKFDSVKDGE AFYNAYAKAK GFGIRKSRFN TNKEGKVVSR 120 LWLCLREDQR LPIYLDGVAE KSRAPKALTR VGCKAQFRIR YDADAGEGEK YVVTHFVTDH 180 NHELAEQHCV IYLRSHCSLN SVDKAQAMAM RNVGVKTSQI MDYMINQSGS YENVGFVRTD 240 LYNHIQAKRR AEVEDGDAQA NETIETYTWV LETFMEAMGN KAPVSVLTDG DKSMREAIRR 300 VFPDARHRLC NWHLGKNVVS NVHISGFAHA FKQCMDMETD KTKFEHG

Sequence ? help Back to Top

Protein Sequence Length: 347 aa Download sequence

MARAEVQREG DDYDIPNEAD DIRLMNESQV EPYYGCEVGS SNEEATNMNV EDGGADVIKE  60
MVDDAHGNDM VGDVECAILE QKFDSVKDGE AFYNAYAKAK GFGIRKSRFN TNKEGKVVSR  120
LWLCLREDQR LPIYLDGVAE KSRAPKALTR VGCKAQFRIR YDADAGEGEK YVVTHFVTDH  180
NHELAEQHCV IYLRSHCSLN SVDKAQAMAM RNVGVKTSQI MDYMINQSGS YENVGFVRTD  240
LYNHIQAKRR AEVEDGDAQA NETIETYTWV LETFMEAMGN KAPVSVLTDG DKSMREAIRR  300
VFPDARHRLC NWHLGKNVVS NVHISGFAHA FKQCMDMETD KTKFEHG

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	4e-19	FAR1 family protein