PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028115691.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

MYB

Protein Properties

Length: 917aa MW: 101186 Da PI: 4.9704

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028115691.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	56.6	6e-18	37	83	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g WT+eEd++l +av+++ g++Wk+Ia+++ Rt+ qc +rwqk+l XP_028115691.1 37 KGQWTAEEDDILCKAVQRFKGKNWKKIAECFK-DRTDVQCLHRWQKVL 83 799**************************9.**********986 PP
2	Myb_DNA-binding	65.1	1.3e-20	89	135	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+W++eEde++v++v ++G++ W+tIa++++ gR +kqc++rw+++l XP_028115691.1 89 KGPWSKEEDEIIVELVDKYGPKKWSTIAQHLP-GRIGKQCRERWHNHL 135 79****************************.***********97 PP
3	Myb_DNA-binding	52.4	1.2e-16	141	183	1	45
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 +++WT+eE++ l++a++ +G++ W+ ++ ++ gR+++ +k++w+ XP_028115691.1 141 KQAWTQEEELALIRAHQIYGNK-WAELMKFLP-GRSDNAIKNHWN 183 799*****************.*****.*********8 PP

Sequence ? help Back to Top
Protein Sequence Length: 917 aa Download sequence
MESDRTNATT SEGVSDGLQR VPPLHGRTSG PRRRSTKGQW TAEEDDILCK AVQRFKGKNW 60 KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEII VELVDKYGPK KWSTIAQHLP 120 GRIGKQCRER WHNHLNPNIN KQAWTQEEEL ALIRAHQIYG NKWAELMKFL PGRSDNAIKN 180 HWNSSVKKKL DSYLASGLLA QFQGLPHHVR HPNQSMPSSS STVQQSSGDD SIPKEETDAE 240 EISECSQGST VIGCSQSGSD IANVAAYTRD DWQLPEESSR GKDPSFSPAS CSENYHTSFQ 300 EVAFSMPDVP CEVDGSSKFL QQNFSNDWES FAGKDWQLNL NDLLNITSLD LGQKSSEFLI 360 QCLGGNENHE VVPFPLQTCV SSSASPSMGN MDFESDQPSN YQLPETAGTS SSQSYYHRGS 420 HMLETLCSQP YAVPSQLPPD DGAIFFASDA NQFNDLSHAN QEKQLVNSPN EGFICTNDSV 480 NSPRDNGTDG MGLQDQPDQA NDSLKVVPVD AFSSGPPNHI QTSSSVNDSP IVPTSEQQDR 540 GPLFYEPPRF PSLDIPFFSC DLIQSDNYTQ QEYSPLGIRQ LMMSTVNCFT PFRFCDSPSQ 600 DGSPDAVLKS AAKTFTCTPS ILKKRTRDLV SPMSEKRVEK KLESDMNLES FSSLARDFSR 660 LDVMFDENGN KKAPLRLSPS SNQKGKSGNS TSTKENLNQC SRKLDTTLNQ SALSEFSSGN 720 PCSSSIVNSA QSAPASNPQE IMAGSSGNAA GAENLNIFID TPFKRSIESP SAWKSPWFIN 780 SFVPGLRVDT DITIEDIGYF MSPGDRSYDA IGLMKQLSEH TAAAFADAQE VLGDATPETV 840 LKERCSNHQN PEQENNCVLK SPPENHALLP SNISTERRVL DFSECGTPGK GKGNENGILS 900 TTKSFSSPPS YLLKGCR

Sequence ? help Back to Top

Protein Sequence Length: 917 aa Download sequence

MESDRTNATT SEGVSDGLQR VPPLHGRTSG PRRRSTKGQW TAEEDDILCK AVQRFKGKNW  60
KKIAECFKDR TDVQCLHRWQ KVLNPELVKG PWSKEEDEII VELVDKYGPK KWSTIAQHLP  120
GRIGKQCRER WHNHLNPNIN KQAWTQEEEL ALIRAHQIYG NKWAELMKFL PGRSDNAIKN  180
HWNSSVKKKL DSYLASGLLA QFQGLPHHVR HPNQSMPSSS STVQQSSGDD SIPKEETDAE  240
EISECSQGST VIGCSQSGSD IANVAAYTRD DWQLPEESSR GKDPSFSPAS CSENYHTSFQ  300
EVAFSMPDVP CEVDGSSKFL QQNFSNDWES FAGKDWQLNL NDLLNITSLD LGQKSSEFLI  360
QCLGGNENHE VVPFPLQTCV SSSASPSMGN MDFESDQPSN YQLPETAGTS SSQSYYHRGS  420
HMLETLCSQP YAVPSQLPPD DGAIFFASDA NQFNDLSHAN QEKQLVNSPN EGFICTNDSV  480
NSPRDNGTDG MGLQDQPDQA NDSLKVVPVD AFSSGPPNHI QTSSSVNDSP IVPTSEQQDR  540
GPLFYEPPRF PSLDIPFFSC DLIQSDNYTQ QEYSPLGIRQ LMMSTVNCFT PFRFCDSPSQ  600
DGSPDAVLKS AAKTFTCTPS ILKKRTRDLV SPMSEKRVEK KLESDMNLES FSSLARDFSR  660
LDVMFDENGN KKAPLRLSPS SNQKGKSGNS TSTKENLNQC SRKLDTTLNQ SALSEFSSGN  720
PCSSSIVNSA QSAPASNPQE IMAGSSGNAA GAENLNIFID TPFKRSIESP SAWKSPWFIN  780
SFVPGLRVDT DITIEDIGYF MSPGDRSYDA IGLMKQLSEH TAAAFADAQE VLGDATPETV  840
LKERCSNHQN PEQENNCVLK SPPENHALLP SNISTERRVL DFSECGTPGK GKGNENGILS  900
TTKSFSSPPS YLLKGCR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G32730.1	0.0	MYB family protein