PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028115579.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family WRKY
Protein Properties Length: 336aa    MW: 36788.7 Da    PI: 4.8849
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028115579.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY962.6e-30159217259
                     --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
            WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                     +D ++WrKYGqK++kgs++prsYYrC+s+ gC ++k+vers++dp+++++tY+ eH h+
  XP_028115579.1 159 SDTWAWRKYGQKPIKGSPHPRSYYRCSSSkGCLARKQVERSESDPEMFVVTYTAEHCHS 217
                     79*************************998****************************7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 336 aa     Download sequence    
MMSEFIGGGD GDLQAVVRGF NNDFTMDNPP ATCFASASTI QQDYDDFDFS AFPDLFETTT  60
STTTTVLDEL DELYKPFYPV LNLNPLSSPP QTILSSSSSS SISVSGGGKR EPEKEPFCGS  120
AGDVVSGAAA TTAVGVKYKR RKTQHKRVVL QVTAEGLSSD TWAWRKYGQK PIKGSPHPRS  180
YYRCSSSKGC LARKQVERSE SDPEMFVVTY TAEHCHSQPT RRSSLAGTTR HKFSTPKSSA  240
ITGGDSHSDG SPISSSALSP PSPTPSLKKK STEEEDEQRM RIIEDGQHDD NGLVIYDMIL  300
SDDLLLGFDE LDRLMNSDVA YNGGFQEQYS PMIFPY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G01250.12e-46WRKY family protein