PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028115484.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | GRAS | ||||||||
Protein Properties | Length: 546aa MW: 60654.5 Da PI: 5.9751 | ||||||||
Description | GRAS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | GRAS | 414 | 1.4e-126 | 174 | 546 | 1 | 374 |
GRAS 1 lvelLlecAeavssgdlelaqalLarlselaspdgdpmqRlaayfteALaarlarsvselykalppsetseknsseelaalklfsevsPilkfsh 95 l++ L++cAeavs++d+e a++l+ +l+ ++s g+p+qRl ay++e+L+arl++s+s +yk+l+++e +sse +++++++++++P++kf++ XP_028115484.1 174 LKQMLVACAEAVSEEDMETASRLMLKLEGMVSVCGEPIQRLGAYMLEGLRARLLSSGSLIYKKLKCREVL-PTSSELMSYMHVLYQICPYYKFAY 267 5799****************************************************************98.5789999***************** PP GRAS 96 ltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesg..skeeleetgerLakfAeelgvpfefnvlvakrled 188 aN I ea+e+e+r+HiiDf++ qG QW+ L++ La+Rp+gpp +RiTgv++++s + l +gerL+k+A+++gv+f f+ +a + + XP_028115484.1 268 NSANVVIKEAMENESRIHIIDFQLAQGSQWVDLIKDLAKRPGGPPYIRITGVDDSDSAhaRGGGLDIVGERLSKVAASCGVSFGFHG-AAMSGCE 361 ******************************************************8887889999***********************.89999** PP GRAS 189 leleeLrvkpgEalaVnlvlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadhnsesFlerflealeyysalfdsleaklpreseeri 283 +el +Lrv++gEalaVn+ ++lh+++desv+++++rd++L+lvkslsPkv+++veqe+++n++ F+ rf e+l+yy+a+f+s++a pr++++ri XP_028115484.1 362 VELTNLRVQHGEALAVNFPYMLHHMPDESVTTSNHRDRLLRLVKSLSPKVMILVEQESNTNTAAFVPRFKETLDYYMAMFESIDAARPRDDKQRI 456 *********************************************************************************************** PP GRAS 284 kvErellgreivnvvacegaerrerhetlekWrerleeaGFkpvplsekaakqaklllrkvksdgyrveeesgslvlgWkdrpLvsvSaWr 374 + E+++++r+ivn++acegaer+erhe ++kWr+rl++aGF p p+s+++ +++++l+ ++++ +r e++g l+lgWk+r L + SaWr XP_028115484.1 457 SAEEHCVARDIVNIIACEGAERVERHEPFGKWRSRLMMAGFMPCPMSSSVSIEISRVLKDYSKN-FRFAERDGVLYLGWKNRVLATSSAWR 546 **************************************************************66.*************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 546 aa Download sequence |
MQPSQEQQSS GSIHGLYHQP MQQIEPYCIS PFQILTNNVF PENGSQATQV SFQSYNEPYF 60 TLESSPANGY IVYDSPPAVS ISSNRTPFSP QGSQSYLSDP HHSSDNTYGS TVSGSSVVDD 120 GNGLRHILKD LENKLLGPES DDDISSCSFK GAGHQAYSST SSNQMMETSP SLDLKQMLVA 180 CAEAVSEEDM ETASRLMLKL EGMVSVCGEP IQRLGAYMLE GLRARLLSSG SLIYKKLKCR 240 EVLPTSSELM SYMHVLYQIC PYYKFAYNSA NVVIKEAMEN ESRIHIIDFQ LAQGSQWVDL 300 IKDLAKRPGG PPYIRITGVD DSDSAHARGG GLDIVGERLS KVAASCGVSF GFHGAAMSGC 360 EVELTNLRVQ HGEALAVNFP YMLHHMPDES VTTSNHRDRL LRLVKSLSPK VMILVEQESN 420 TNTAAFVPRF KETLDYYMAM FESIDAARPR DDKQRISAEE HCVARDIVNI IACEGAERVE 480 RHEPFGKWRS RLMMAGFMPC PMSSSVSIEI SRVLKDYSKN FRFAERDGVL YLGWKNRVLA 540 TSSAWR |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G17230.1 | 0.0 | GRAS family protein |