PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028115453.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YC | ||||||||
Protein Properties | Length: 248aa MW: 27972.3 Da PI: 6.2215 | ||||||||
Description | NF-YC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NF-YC | 177.9 | 9.6e-56 | 67 | 170 | 1 | 101 |
NF-YC 1 qlksfwekq...iekatdfknhelPlarikkilkadedvkmisaeaPvllskacelfileltlrswlhaeenkrrtlkksdiaaavtrtdifdfl 92 ql+sfw++q iek++dfknh+lPlarikki+kadedv+misaeaP+++++ace+fileltlrsw+h+eenkrrtl+k+diaaa+trtdifdfl XP_028115453.1 67 QLQSFWANQyqeIEKVNDFKNHNLPLARIKKIMKADEDVRMISAEAPIVFARACEMFILELTLRSWNHTEENKRRTLQKNDIAAAITRTDIFDFL 161 89******99999********************************************************************************** PP NF-YC 93 vdivprdel 101 vdivpr++l XP_028115453.1 162 VDIVPREDL 170 ******987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 248 aa Download sequence |
MDQQGQLHYD TSQYEPNQVM GNPSQGSVVT SGGPAHSPSQ PSGSHLAHHQ LAYQHIHQQQ 60 QHQLQQQLQS FWANQYQEIE KVNDFKNHNL PLARIKKIMK ADEDVRMISA EAPIVFARAC 120 EMFILELTLR SWNHTEENKR RTLQKNDIAA AITRTDIFDF LVDIVPREDL KDEALASIPR 180 GTVPVGGATD AYPYYYMPAQ HSPQGGAPGM IVGQPVMDPV LYAQQPHPYM AQQMWPQVPQ 240 QPQSPSDS |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 140 | 146 | RRTLQKN |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G08970.3 | 1e-83 | NF-YC family protein |