PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028115186.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | WRKY | ||||||||
Protein Properties | Length: 311aa MW: 34324.3 Da PI: 7.0322 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 106.9 | 1e-33 | 159 | 217 | 1 | 59 |
---SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 1 ldDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 ldDgy+WrKYGqK vk+s+fprsYYrCt+agC vkk+vers++d+++v++tYeg+H+h+ XP_028115186.1 159 LDDGYRWRKYGQKAVKNSPFPRSYYRCTTAGCGVKKRVERSSDDQSIVVTTYEGTHTHP 217 59********************************************************8 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence |
MLVVVSDQFM EKRGELKTEN SMPNSTFSGP FPANTTTTTS YGFPGIFDMP CDGDKGSSLG 60 FIHLLGIQDD NPSLFDLFQT PVIPSPASEV VNTPATPNSL SISSSSNEAA NDEQNKTTVE 120 EEDEQNQKKA KKQLKPKKTP KRPREPRFAF MTKSEADHLD DGYRWRKYGQ KAVKNSPFPR 180 SYYRCTTAGC GVKKRVERSS DDQSIVVTTY EGTHTHPCPV APRGSIGVMP DSSGFGGIGG 240 TSSFVIPQPQ FQPYFHNSIP SLGFTNATNS PFPTFFQERQ FYPSLSSSLL RDDGLLQDIL 300 PSQVRKEAKP E |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G49520.1 | 1e-53 | WRKY family protein |