PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028115052.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

TALE

Protein Properties

Length: 453aa MW: 50440.9 Da PI: 6.1433

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028115052.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	23.3	1.1e-07	400	433	21	54
HSSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 21 knrypsaeereeLAkklgLterqVkvWFqNrRak 54 k +yp++e++++L +++gL+ +q+ +WF N+R + XP_028115052.1 400 KWPYPTEEDKARLVQETGLQLKQINNWFINQRKR 433 469*****************************87 PP
2	ELK	27.6	6.8e-10	354	375	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++L+++++E++ XP_028115052.1 354 ELKHELKQGYKEKLVDIREEIL 375 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 453 aa Download sequence
MAYPNHLSQE MALHHFSDQH LGENTSVLRT ILPEQLGQSS PDGSGKEHKD LQRFIMESAG 60 KTAEHHHQPP PQVGVGPTWL NSAILRQQNQ YGEANFLNLH TNSDSAASNQ WLSRSILQRN 120 VSDVRDDNDS MIAAAISHES ADLNNNQNDN RNIGSNQVEN NGGGGGGGGG ELTESDVGGS 180 DGVMNWQNAK HKSEILSHPL YEQLLSAHVA CLRIATPVDQ LPRIDAQLAQ SQHVVAKYSA 240 LGHGNIGDDK ELDQFMTHYV LLLCSFKEQL QQHVRVHAME AVMACWEIEQ SLQSLTGVSP 300 GGGTGATMSD DDDDQVDSDT NMFDGSFDGP DTMGFGPLIP TESERSLMER VRQELKHELK 360 QGYKEKLVDI REEILRKRRA GKLPGDTTSV LKAWWQSHSK WPYPTEEDKA RLVQETGLQL 420 KQINNWFINQ RKRNWHSNPS TSTVLKSKRK RGQ

Sequence ? help Back to Top

Protein Sequence Length: 453 aa Download sequence

MAYPNHLSQE MALHHFSDQH LGENTSVLRT ILPEQLGQSS PDGSGKEHKD LQRFIMESAG  60
KTAEHHHQPP PQVGVGPTWL NSAILRQQNQ YGEANFLNLH TNSDSAASNQ WLSRSILQRN  120
VSDVRDDNDS MIAAAISHES ADLNNNQNDN RNIGSNQVEN NGGGGGGGGG ELTESDVGGS  180
DGVMNWQNAK HKSEILSHPL YEQLLSAHVA CLRIATPVDQ LPRIDAQLAQ SQHVVAKYSA  240
LGHGNIGDDK ELDQFMTHYV LLLCSFKEQL QQHVRVHAME AVMACWEIEQ SLQSLTGVSP  300
GGGTGATMSD DDDDQVDSDT NMFDGSFDGP DTMGFGPLIP TESERSLMER VRQELKHELK  360
QGYKEKLVDI REEILRKRRA GKLPGDTTSV LKAWWQSHSK WPYPTEEDKA RLVQETGLQL  420
KQINNWFINQ RKRNWHSNPS TSTVLKSKRK RGQ

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	431	451	RKRNWHSNPSTSTVLKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.2	0.0	TALE family protein