PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028114972.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | FAR1 | ||||||||
Protein Properties | Length: 341aa MW: 39395 Da PI: 8.6088 | ||||||||
Description | FAR1 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | FAR1 | 79.8 | 4.9e-25 | 27 | 116 | 1 | 90 |
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r++ +k+k +++ ++r +vC+keg r+ +k++ ++++ra+trtgC+a+l vk+++ +g+++vt+++++HnH+l+ XP_028114972.1 27 NFYNTYGGRIGFSIRRDFCRKNKFTNQLICRLLVCNKEGIRKVDKRD-PLAKNPRAKTRTGCEARLYVKLDEgTGRFVVTDFKEKHNHDLV 116 6*******************************************999.999**************************************97 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 341 aa Download sequence |
MDIEPENDCA WKPKHGMTFD SEQSVYNFYN TYGGRIGFSI RRDFCRKNKF TNQLICRLLV 60 CNKEGIRKVD KRDPLAKNPR AKTRTGCEAR LYVKLDEGTG RFVVTDFKEK HNHDLVSLEC 120 AHMLPSQRKI STTQSIELDL AAQSGLRLGQ SFELMGKEAG GRQCLGFTKL DQKNYLRTKR 180 QQSLAYGEVG SVLQYFKEKS LQNPSFFYTF QLDNEEQITN MFWADAQIIM DYAQFGDVVT 240 FDTTYKLNKE HRPFASFVGF NHHRETVIFG ATLLYNETAE SFVWLFENFL EAMSKKAPKT 300 LFSNQDAAMA KAIPIVMPDT SHRLCNWHLM QNALKHVNCL F |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT4G38180.1 | 9e-82 | FAR1 family protein |