PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028114913.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | G2-like | ||||||||
Protein Properties | Length: 418aa MW: 46780.1 Da PI: 10.3569 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 68.4 | 1.2e-21 | 83 | 135 | 1 | 54 |
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYR 54 k+r+ Wt LH++Fv+av+ L G +kA+Pk+il++m+ + ++l+ v+ HLQkYR XP_028114913.1 83 KKRVSWTVVLHNKFVDAVRLL-GVDKAVPKEILQIMNEPVISLASVANHLQKYR 135 68*******************.******************************** PP | |||||||
2 | Myb_DNA-binding | 26.3 | 1.7e-08 | 85 | 135 | 1 | 48 |
TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 r +WT ++ ++vdav++lG + +k I + m+ +l ++ +++qky+ XP_028114913.1 85 RVSWTVVLHNKFVDAVRLLGVDkaVPKEILQIMNePVISLASVANHLQKYR 135 679********************************88999**********7 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 418 aa Download sequence |
MRLNLKHKFG IAVMSTNDDK ESVMKGVKHG ARDYLIKPLR LEEVKNIWQH VVRQNLFNTT 60 KFGTVQEGTD QNPPIPSAQK KKKKRVSWTV VLHNKFVDAV RLLGVDKAVP KEILQIMNEP 120 VISLASVANH LQKYRNPLRK ENTKAKMTQE SENNINSNRT NGLLSDTITT ACINQGLNTL 180 NHHNRFAEQD MSTGIISFGS RLQTFGASTS NAKLLQQNQL PPKVVADQMR PTVLGSVPPS 240 QFFAANPSPH HELNGTRFHS INSGTEIFYD NFKMSSSQLP RFHTGQSGPS SMPVSFGPYS 300 CPPAAFNLAG VPFQMPNASD QLNPIFQPDS LAMLLPWPRE GRNLANLKVK EEPINFPFDM 360 RQITDDSIKK GQFGQHRYPF ENTEREIKSH HNNSSSSSDD GLLSSIVKQF SSNSAPRL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G16110.1 | 1e-30 | ARR-B family protein |