PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114707.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family SBP
Protein Properties Length: 448aa    MW: 49460.4 Da    PI: 8.8364
Description SBP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114707.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1SBP125.91.6e-39173250178
                     --SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS
             SBP   1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 
                     +CqvegC+ dls+akeyhr+h+vCe hsk+++v+v gle+rfCqqCsrfh+lsefDe+krsCr+rL++hn+rrrk+q+
  XP_028114707.1 173 RCQVEGCNLDLSSAKEYHRKHRVCESHSKCAKVVVCGLERRFCQQCSRFHNLSEFDEKKRSCRKRLSDHNARRRKPQQ 250
                     6**************************************************************************997 PP

Sequence ? help Back to Top
Protein Sequence    Length: 448 aa     Download sequence    
MDWNAKWDWE NLITFNSKTV ESPKKQPTDW EIGEGEIDTV SFNLSGGGAV GSSSDLAHGS  60
SARSSVSASM DSSSKEISKM SKIAVEAFHD FPEDFGKKNE LARTELAGTS LPLEPSVSSG  120
ELLIGLKLGK RTYFENNYAG DNAKTSSLSV IPVSSAASTA KKIKSSSQTH RPRCQVEGCN  180
LDLSSAKEYH RKHRVCESHS KCAKVVVCGL ERRFCQQCSR FHNLSEFDEK KRSCRKRLSD  240
HNARRRKPQQ DAIQFDSSML LSSPFLDGKQ QMCFALNNTP LLRTRSSANP TWESACSSKY  300
FTLTKGHLSR SGKTGGIDGQ PQLPGIELSH SISMLGQNTR AEIFTRGPKE SMLSSNLDAV  360
PNLHRALSLL STDSWGSESP NIIPDHPIQR NFTSMPQFAM LPQGLPLTSS EYWQSEWSTD  420
ARRAHSLTTN DSGHFQGIKV FKSSNLLN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1230247KKRSCRKRLSDHNARRRK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G43270.11e-66SBP family protein