PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028114705.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | SBP | ||||||||
Protein Properties | Length: 448aa MW: 49460.4 Da PI: 8.8364 | ||||||||
Description | SBP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SBP | 125.9 | 1.6e-39 | 173 | 250 | 1 | 78 |
--SSTT-----TT--HHHHHTT--HHHHT-S-EEETTEEEEE-TTTSSEEETTT--SS--S-STTTT-------S--- CS SBP 1 lCqvegCeadlseakeyhrrhkvCevhskapvvlvsgleqrfCqqCsrfhelsefDeekrsCrrrLakhnerrrkkqa 78 +CqvegC+ dls+akeyhr+h+vCe hsk+++v+v gle+rfCqqCsrfh+lsefDe+krsCr+rL++hn+rrrk+q+ XP_028114705.1 173 RCQVEGCNLDLSSAKEYHRKHRVCESHSKCAKVVVCGLERRFCQQCSRFHNLSEFDEKKRSCRKRLSDHNARRRKPQQ 250 6**************************************************************************997 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 448 aa Download sequence |
MDWNAKWDWE NLITFNSKTV ESPKKQPTDW EIGEGEIDTV SFNLSGGGAV GSSSDLAHGS 60 SARSSVSASM DSSSKEISKM SKIAVEAFHD FPEDFGKKNE LARTELAGTS LPLEPSVSSG 120 ELLIGLKLGK RTYFENNYAG DNAKTSSLSV IPVSSAASTA KKIKSSSQTH RPRCQVEGCN 180 LDLSSAKEYH RKHRVCESHS KCAKVVVCGL ERRFCQQCSR FHNLSEFDEK KRSCRKRLSD 240 HNARRRKPQQ DAIQFDSSML LSSPFLDGKQ QMCFALNNTP LLRTRSSANP TWESACSSKY 300 FTLTKGHLSR SGKTGGIDGQ PQLPGIELSH SISMLGQNTR AEIFTRGPKE SMLSSNLDAV 360 PNLHRALSLL STDSWGSESP NIIPDHPIQR NFTSMPQFAM LPQGLPLTSS EYWQSEWSTD 420 ARRAHSLTTN DSGHFQGIKV FKSSNLLN |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 230 | 247 | KKRSCRKRLSDHNARRRK |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G43270.1 | 1e-66 | SBP family protein |