PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114601.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 469aa MW: 54733 Da PI: 7.6678

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114601.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	79.5	6.2e-25	31	119	1	90
FAR1 1 kfYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 +fYn+Y+ ++GFs+r+ + +ks ++g+it+r+fvC+keg+r +k++ + ++++r+e rtgC+a++++k ++ +k+ v++++++HnH ++ XP_028114601.1 31 DFYNTYGGRLGFSIRRGYVNKS-KDGQITSRQFVCNKEGFRVVDKRD-SLTKNPRQEVRTGCQARVVIKWDRnIQKFFVSDFVEQHNHIFV 119 6******************9.7788************9999.99***************99989************987 PP

Sequence ? help Back to Top
Protein Sequence Length: 469 aa Download sequence
MEPNNHENDG GECDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKDGQITSR 60 QFVCNKEGFR VVDKRDSLTK NPRQEVRTGC QARVVIKWDR NIQKFFVSDF VEQHNHIFVP 120 AECTHMLPSQ RKISASQATE IDLAERSGIR LNAAFELMGN EVGGRESLGF TKLDQKNYLR 180 TKRQNSLAYG EAGSILQYFR DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD 240 AVTFDTTYKL NSAHRPFASF VGFNHHRETV IFGAALMYDE TADSFVWLFR RFLEAMSSKA 300 PKTIFTDKDA AMAKAIPILM PNTTHRLYTW HLMQNALRHA NSIFKDKAMK DKEMKSVLYT 360 FIYDIEDEEE FMLKWEEMLD KYEVTDNHWL KLTFGVKEKW GWPYVRNAWG AGMSSTQLSE 420 SFNAFLKDFI QSDHNLMQFF MHLGRVCLRK GTKSYKLNML YAKVAQGEY

Sequence ? help Back to Top

Protein Sequence Length: 469 aa Download sequence

MEPNNHENDG GECDWKPRVR MTFDTEQEAY DFYNTYGGRL GFSIRRGYVN KSKDGQITSR  60
QFVCNKEGFR VVDKRDSLTK NPRQEVRTGC QARVVIKWDR NIQKFFVSDF VEQHNHIFVP  120
AECTHMLPSQ RKISASQATE IDLAERSGIR LNAAFELMGN EVGGRESLGF TKLDQKNYLR  180
TKRQNSLAYG EAGSILQYFR DKSLENPSFF YSVQLDNEEQ ITNIFWADAQ MIMDYGQFGD  240
AVTFDTTYKL NSAHRPFASF VGFNHHRETV IFGAALMYDE TADSFVWLFR RFLEAMSSKA  300
PKTIFTDKDA AMAKAIPILM PNTTHRLYTW HLMQNALRHA NSIFKDKAMK DKEMKSVLYT  360
FIYDIEDEEE FMLKWEEMLD KYEVTDNHWL KLTFGVKEKW GWPYVRNAWG AGMSSTQLSE  420
SFNAFLKDFI QSDHNLMQFF MHLGRVCLRK GTKSYKLNML YAKVAQGEY

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-101	FAR1 family protein