PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114494.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

Protein Properties

Length: 439aa MW: 50826.4 Da PI: 6.0093

Description

B3 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114494.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	B3	34.9	2.8e-11	111	194	7	83
.-HHHHTT-EE--HHH.HTT....---..--SEEEEEETTS-EEEEEE..EEETTE...EEE-TTHHHHHHHHT--TT-EEEEE CS B3 7 psdvlksgrlvlpkkfaeeh....ggkkeesktltledesgrsWevkliyrkksgr...yvltkGWkeFvkangLkegDfvvFk 83 + + ++grl++p + ae h +g+++ + ++++ d + W ++l+y+ + ++ + +t+GW++Fv+ gLk+ D++ F+ XP_028114494.1 111 TQSDIERGRLSIPFQTAELHfpstNGVSNYENQIVICDIRHDNWYMTLTYNARESSafkFAITSGWQGFVDCYGLKAMDVIRFY 194 456677899*************777777889*************5555555799*********************9 PP
2	B3	36.3	1e-11	270	357	2	83
EEE-..-HHHHTT-EE--HHH.HTT...........---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEE CS B3 2 fkvltpsdvlksgrlvlpkkfaeeh...........ggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFk 83 + +l+ +dv + g+l +p + a++h +++ ++ + d++++ W++++ y+ +++++ +GW +Fv ++gL+ D++ F+ XP_028114494.1 270 ELQLMLNDVEQ-GMLFIPEQRAAKHfppllthipyyNYE--H--QIEVSDTQNQNWKMTIVYNSLLRAFIIVRGWHRFVVSHGLEFMDVICFY 357 55666666665.56***********999988754322..3..59999*****************************************9 PP

Sequence ? help Back to Top
Protein Sequence Length: 439 aa Download sequence
MVMESDVQRE EEEEEKAKQV SKEGNASSST PLEVSATESE GSIKGNVHPP FNKQTIHNVD 60 DLLSKSKFGG VVPCLSERAL TNRRNEYPIP NIATVVEFHR SVHCLFHMGL TQSDIERGRL 120 SIPFQTAELH FPSTNGVSNY ENQIVICDIR HDNWYMTLTY NARESSAFKF AITSGWQGFV 180 DCYGLKAMDV IRFYKPFKRL HSRHFLIDYV KAEENAVLPS QNSCMKQGCD EARDDAILES 240 NFGASCSSER TNEEVQDPES ESHRRIFLFE LQLMLNDVEQ GMLFIPEQRA AKHFPPLLTH 300 IPYYNYEHQI EVSDTQNQNW KMTIVYNSLL RAFIIVRGWH RFVVSHGLEF MDVICFYKTL 360 LRLQDKHFII EHVKRGEAET DNNPPEFKLE NFLFELQLTS GYVSDNWLKL PKEEVRNHFP 420 AIEIPPGIRL NFTDARNKH

Sequence ? help Back to Top

Protein Sequence Length: 439 aa Download sequence

MVMESDVQRE EEEEEKAKQV SKEGNASSST PLEVSATESE GSIKGNVHPP FNKQTIHNVD  60
DLLSKSKFGG VVPCLSERAL TNRRNEYPIP NIATVVEFHR SVHCLFHMGL TQSDIERGRL  120
SIPFQTAELH FPSTNGVSNY ENQIVICDIR HDNWYMTLTY NARESSAFKF AITSGWQGFV  180
DCYGLKAMDV IRFYKPFKRL HSRHFLIDYV KAEENAVLPS QNSCMKQGCD EARDDAILES  240
NFGASCSSER TNEEVQDPES ESHRRIFLFE LQLMLNDVEQ GMLFIPEQRA AKHFPPLLTH  300
IPYYNYEHQI EVSDTQNQNW KMTIVYNSLL RAFIIVRGWH RFVVSHGLEF MDVICFYKTL  360
LRLQDKHFII EHVKRGEAET DNNPPEFKLE NFLFELQLTS GYVSDNWLKL PKEEVRNHFP  420
AIEIPPGIRL NFTDARNKH

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G25560.1	5e-09	RAV family protein