PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028114428.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | MIKC_MADS | ||||||||
Protein Properties | Length: 205aa MW: 23830.1 Da PI: 10.4174 | ||||||||
Description | MIKC_MADS family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | SRF-TF | 86.4 | 1.6e-27 | 9 | 59 | 1 | 51 |
S---SHHHHHHHHHHHHHHHHHHHHHHHHHHT-EEEEEEE-TTSEEEEEE- CS SRF-TF 1 krienksnrqvtfskRrngilKKAeELSvLCdaevaviifsstgklyeyss 51 krien s rqvtfskRrng+lKKA+ELS+LCdaeva++ifs++gk y ++s XP_028114428.1 9 KRIENPSSRQVTFSKRRNGLLKKAFELSILCDAEVALLIFSPSGKAYQFCS 59 79***********************************************96 PP | |||||||
2 | K-box | 65.8 | 1.5e-22 | 85 | 171 | 13 | 99 |
K-box 13 kaeslqqelakLkkeienLqreqRhllGedLesLslkeLqqLeqqLekslkkiRskKnellleqieelqkkekelqeenkaLrkkle 99 ++e + e++ Lk+ ie+L+ q+h+ GedL+ L +keL+q+e+qL ++++++Rsk +++ eq++ ++++ ++lqeen+ L+k+l+ XP_028114428.1 85 TMEVRRSEMDELKSTIETLEARQKHFAGEDLSMLGMKELKQIERQLRNGVERVRSKTRRIISEQTNFMKERHRALQEENTHLQKRLN 171 5566789****************************************************************************9875 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 205 aa Download sequence |
MRRGKVELKR IENPSSRQVT FSKRRNGLLK KAFELSILCD AEVALLIFSP SGKAYQFCSH 60 DMDRTISRYR SEVRLSQFND QGLRTMEVRR SEMDELKSTI ETLEARQKHF AGEDLSMLGM 120 KELKQIERQL RNGVERVRSK TRRIISEQTN FMKERHRALQ EENTHLQKRL NDLQDTDGSS 180 RTFAPGTSGT LNAFQRLLYD GLAES |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G03710.1 | 4e-46 | MIKC_MADS family protein |