PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028114333.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | NF-YA | ||||||||
Protein Properties | Length: 217aa MW: 23952.7 Da PI: 9.6085 | ||||||||
Description | NF-YA family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | CBFB_NFYA | 103.8 | 1.5e-32 | 120 | 176 | 1 | 58 |
CBFB_NFYA 1 deplYVNaKQyqrIlkRRqkRakleeekkldeksrkpylheSRhkhAlrRpRgsgGrF 58 +ep++VNaKQy++Il+RRq+Rak+e+ +k+ +ksrkpylheSRh+hAlrR+Rg+gGrF XP_028114333.1 120 EEPVFVNAKQYHGILRRRQSRAKAESVNKV-TKSRKPYLHESRHQHALRRARGCGGRF 176 69****************************.**************************9 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 217 aa Download sequence |
MPSSVHDLSD DSEAEGQQKH SETQVQSSAP VTGMSYPGLT PPNVQYATPP QLGPGNTMGQ 60 AAYPYPDPYY RSIFAPYDTP PYPAQPFPAQ VTQPVKLFQV HLQFMGIQQS GVPLPSDAVE 120 EPVFVNAKQY HGILRRRQSR AKAESVNKVT KSRKPYLHES RHQHALRRAR GCGGRFLNSK 180 KAESQHQKEA ASGDKKSQAN INLNCDKNDR APSENAS |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30500.2 | 1e-66 | NF-YA family protein |