PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114317.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 297aa    MW: 33675.5 Da    PI: 7.5174
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114317.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.34.2e-16155254197
                     EEEE-..-HHHHT.T-EE--HHH.HTT..---..--SEEEEEETTS-EEEEEE..EEETTE..EEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlks.grlvlpkkfaeeh..ggkkeesktltledesgrsWevkliyrkksgr..yvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+k l+ sd+  + +rlv+pkk+ae++  ++ ++ +  l+++d++g++We+++ ++ +sg+  yvl+ G +++  + + ++gD+v+F++++  e+
  XP_028114317.1 155 FEKLLSASDADHKlARLVIPKKCAEAFfpKITTPHGCPLKIQDTEGKEWEFQFHFWPNSGSkmYVLE-GLRDYMVSVQWQAGDIVTFYRIE-PEK 247
                     88999999987767**************9666666777***************99877777758888.********************887.555 PP

                     ..EEEEE CS
              B3  91 elvvkvf 97 
                     +lv++++
  XP_028114317.1 248 KLVMGLR 254
                     5666655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 297 aa     Download sequence    
MASSSSRKAC FQCEDSNSTQ FRNGWRVRSG HFAQLCNRCS SLYEEGRFCD TYHANDDGWR  60
DCESCGKLVH CGCIASFHAY MLLDFGGVIC MECSKVNFIL ARKRCLYSET QIGIGEPQGD  120
AARPIQIDPQ YWPRVTDQEL QQIARKTNSV VIPLFEKLLS ASDADHKLAR LVIPKKCAEA  180
FFPKITTPHG CPLKIQDTEG KEWEFQFHFW PNSGSKMYVL EGLRDYMVSV QWQAGDIVTF  240
YRIEPEKKLV MGLRKTCASV SPYEEHGTLD DAPISKPNLC FLPRKNSQEC GPSVVKL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G32010.16e-54B3 family protein