PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028114182.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

C2H2

Protein Properties

Length: 449aa MW: 49748.8 Da PI: 9.0402

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028114182.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	15.8	4e-05	59	79	3	23
ETTTTEEESSHHHHHHHHHHT CS zf-C2H2 3 CpdCgksFsrksnLkrHirtH 23 C++Cgk F r nL+ H r H XP_028114182.1 59 CEICGKGFQRDQNLQLHRRGH 79 *******************88 PP
2	zf-C2H2	13.6	0.0002	133	155	1	23
EEETTTTEEESSHHHHHHHHHHT CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirtH 23 +kC++C+k++ +s+ k H +t+ XP_028114182.1 133 WKCEKCSKRYAVQSDWKAHSKTC 155 58*****************9998 PP

Sequence ? help Back to Top
Protein Sequence Length: 449 aa Download sequence
MFEKMAEETI PNSFVQNPTG GSIPPPLKKK RNLPGTPDPE AEVIALSPKT LMATNRFLCE 60 ICGKGFQRDQ NLQLHRRGHN LPWKLKQRTS KEPRKRVYVC PEKTCVHHHP SRALGDLTGI 120 KKHFSRKHGE KKWKCEKCSK RYAVQSDWKA HSKTCGTREY KCDCGTIFSR RDSFITHRAF 180 CDALAEETAR VTAASSINNA MTNNINYHFI GTPTGHGMPQ HFSSIFKPIS NNDETIDPSK 240 RGLSPWMNNN NNNLQEIHQI GSVSSGPVYG DPFVPCSNPP PSDYQLNWVF GNKLSSINTE 300 EITSSSSLVS VPSLYSTQHH SHQTSSSATM SATALLQKAA QIGATSTTTD PSSFLGSFEI 360 KCNNNNEVQD GNKFFGMYGT NPITTSLGRS DVESSVNDIS TFNQLQMYPS KRRNIQNEDG 420 TAAAAGQTRD FLGVGFQSIC HPSSVNGWI

Sequence ? help Back to Top

Protein Sequence Length: 449 aa Download sequence

MFEKMAEETI PNSFVQNPTG GSIPPPLKKK RNLPGTPDPE AEVIALSPKT LMATNRFLCE  60
ICGKGFQRDQ NLQLHRRGHN LPWKLKQRTS KEPRKRVYVC PEKTCVHHHP SRALGDLTGI  120
KKHFSRKHGE KKWKCEKCSK RYAVQSDWKA HSKTCGTREY KCDCGTIFSR RDSFITHRAF  180
CDALAEETAR VTAASSINNA MTNNINYHFI GTPTGHGMPQ HFSSIFKPIS NNDETIDPSK  240
RGLSPWMNNN NNNLQEIHQI GSVSSGPVYG DPFVPCSNPP PSDYQLNWVF GNKLSSINTE  300
EITSSSSLVS VPSLYSTQHH SHQTSSSATM SATALLQKAA QIGATSTTTD PSSFLGSFEI  360
KCNNNNEVQD GNKFFGMYGT NPITTSLGRS DVESSVNDIS TFNQLQMYPS KRRNIQNEDG  420
TAAAAGQTRD FLGVGFQSIC HPSSVNGWI

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G44160.1	1e-144	C2H2 family protein