PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114127.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family FAR1
Protein Properties Length: 333aa    MW: 37764 Da    PI: 7.8679
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR156.21.1e-17187273291
            FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                     +Y +YAk+vGFs+  + ++   ++g+  +    Cs+ g+r+++++   +  ++  +t++gC+a+++ + +kdg++++t+++leHnH+l p
  XP_028114127.1 187 YYGKYAKHVGFSIAHRVQHFG-DDGQLLNFAIECSRAGQRKKKSEV--NPLKPCLSTKIGCTARVRGSVQKDGRYKLTTVNLEHNHDLIP 273
                     8************99987776.8999**************998766..9999***********************************975 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MTLDPPHSQY YKDEYSLVVL KQILIFFVLL RLTSSPESLL RHCCHYWDSA SSGTNNYICL  60
RLSNLSLSHV GSIEKLLWVQ MLDLSHNQLI SIEGLQAMQL LPCLNLRNNK MGSFSTLEPL  120
KLVKSLKVLD ISYNEISAHA VDTRSTQSER MEVDSNVGEN PLIHEGEDVE EPKKGMGFSS  180
REEVYTYYGK YAKHVGFSIA HRVQHFGDDG QLLNFAIECS RAGQRKKKSE VNPLKPCLST  240
KIGCTARVRG SVQKDGRYKL TTVNLEHNHD LIPTDSRHFA MNKKILTPVK RRLEINDQAG  300
IGVSRNFHSM VVEAGGYESL TFDERDARNY IES
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G38180.11e-18FAR1 family protein