PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028114097.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family HSF
Protein Properties Length: 290aa    MW: 32033.5 Da    PI: 5.0095
Description HSF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028114097.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HSF_DNA-bind116.61.6e-36101012102
                     HHHHHHHHHCTGGGTTTSEESSSSSEEEES-HHHHHHHTHHHHSTT--HHHHHHHHHHTTEEE---SSBTTTTXTTSEEEEESXXXXXXXXXXXX CS
    HSF_DNA-bind   2 FlkklyeiledeelkeliswsengnsfvvldeeefakkvLpkyFkhsnfaSFvRQLnmYgFkkvkdeekkskskekiweFkhksFkkgkkellek 96 
                     Fl+k+y++++d++ ++++sw+e+g++fvv+++ +fak++Lp+yFkh+nf+SFvRQLn+YgF+k+  ++         weF++++F +g+kell+k
  XP_028114097.1  10 FLTKTYQLVDDPSSDDVVSWNESGTTFVVWKTADFAKDLLPNYFKHNNFSSFVRQLNTYGFRKTVPDK---------WEFANENFVRGQKELLTK 95 
                     9***************************************************************9999.........****************** PP

                     XXXXXX CS
    HSF_DNA-bind  97 ikrkks 102
                     i+r+k 
  XP_028114097.1  96 IRRRKA 101
                     ***985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 290 aa     Download sequence    
MGQRSVPAPF LTKTYQLVDD PSSDDVVSWN ESGTTFVVWK TADFAKDLLP NYFKHNNFSS  60
FVRQLNTYGF RKTVPDKWEF ANENFVRGQK ELLTKIRRRK ALTSSPAGGK SPAAAAIGSP  120
SSPSNSGEDL GSTSTSSPDS KNAGSVEAPA RAQFADLSDE NKKLKRDNEM LTSELAQTKK  180
QCDELISFLT EYVKVAPDQI NRIMLTCDEL NGQIETTGDD DDDDENTEEK SGEGLKLFGV  240
WVNGNKKKRG RDEKLGFGGT NRKEMKTVDY DDAPWMKIST APGETGKVCN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1246266KKKRGRDEKLGFGGTNRKEMK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36990.12e-78HSF family protein