PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID XP_028113986.1
Organism
Camellia sinensis var. sinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
Family B3
Protein Properties Length: 333aa    MW: 38154 Da    PI: 4.8827
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
XP_028113986.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B353.93.2e-17107207198
                     EEEE-..-HHHHTT-EE--HHH.HTT..---..--SEEEEEETTS.-EEEEEE....EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE CS
              B3   1 ffkvltpsdvlksgrlvlpkkfaeeh..ggkkeesktltledesg.rsWevkliy..rkksgryvltkGWkeFvkangLkegDfvvFkldgrsef 90 
                     f+k+l +sdv++++r+++pkk ae++   + ++e++ +++ d +g  +W++k++y  +++s++yvl+ ++ eFv+ + Lk+gD ++ + d+ +++
  XP_028113986.1 107 FQKELQTSDVGSLRRMIVPKKAAEDYlpTLMEKEGFFMRMDDMDGlHVWSFKFRYwpNNTSRMYVLE-NTGEFVNTHALKQGDYMMMYQDQ-QNQ 199
                     99**************************55566899********999******9988899999**99.****************9999554.555 PP

                     ..EEEEE- CS
              B3  91 elvvkvfr 98 
                     ++v++ ++
  XP_028113986.1 200 NFVIRGRK 207
                     55776655 PP
Sequence ? help Back to Top
Protein Sequence    Length: 333 aa     Download sequence    
MGKNEACGFA AGAGVGVGHV VAKKWERGCC DCDESDRTEL TRDHFAGMRS AGVQRKKRMP  60
RQRRSSLNLN LNLNLNLNLL LLPFPSLLVP HVPSPPVIDR TRLRFLFQKE LQTSDVGSLR  120
RMIVPKKAAE DYLPTLMEKE GFFMRMDDMD GLHVWSFKFR YWPNNTSRMY VLENTGEFVN  180
THALKQGDYM MMYQDQQNQN FVIRGRKASD QDIYIECTMN GVNDFCPDDF EVNNNDSYHQ  240
PVPVNFPPVD DTTGPLPFVY DQTPFSSDLN RSYVYETTLS SGSDSSYVYE TTVSNETLLD  300
FWNAPMTYNP KVEPIGNFES IENSSMEELL LSF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G26790.12e-46B3 family protein