PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

XP_028113851.1

Organism

Camellia sinensis var. sinensis

Taxonomic ID

542762

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis

Family

FAR1

Protein Properties

Length: 428aa MW: 49670.1 Da PI: 6.4466

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
XP_028113851.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	47.3	6.6e-15	59	144	2	90
FAR1 2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 fY +YAk+ GF + ++++ + +ge++ C++ r+++++ + +++ +t+++Cka+++ ++++d+++++t+++leH+H+l XP_028113851.1 59 FYAQYAKHSGFAIAFRSQNLT-ADGEVKYFGIECTRARLRTKRSEI--NPLEPSLSTKIDCKARVRPSLQNDERYKLTTVVLEHTHDLI 144 9************998887.8999************9988..8999*********************************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 428 aa Download sequence
MSIVFNFEAT MDIDSNNNSL NGSEEVEEQD NNLDINEIGE VEEPKKVMYF GSKQEVYAFY 60 AQYAKHSGFA IAFRSQNLTA DGEVKYFGIE CTRARLRTKR SEINPLEPSL STKIDCKARV 120 RPSLQNDERY KLTTVVLEHT HDLIPADSRH FSMNKRIRTP VKRRLEVNDA AGIGVARNFH 180 SIVVEAGGYE ALTFDERDVR NYIENVRRLR LELGDAESVT LYFHKMQQQN SNFYSTIDLD 240 EDGRMRNLFW ADARSRAAYK AFGDVVSFDT TYLTKKYDMP FAPFVGVNHH GQTILFGCGL 300 LSNENTETFV WPFKEWLSCM SDAPPKAIIT DQCRAMQNAI EIVFPQARHR WCLWHVMKKI 360 PEKLRGYSQY EGIKVALQNA VYDSLTKDEF EGNWLTMVTK FNLNDNEWLG VLYRERHRWI 420 PAYVKDIF

Sequence ? help Back to Top

Protein Sequence Length: 428 aa Download sequence

MSIVFNFEAT MDIDSNNNSL NGSEEVEEQD NNLDINEIGE VEEPKKVMYF GSKQEVYAFY  60
AQYAKHSGFA IAFRSQNLTA DGEVKYFGIE CTRARLRTKR SEINPLEPSL STKIDCKARV  120
RPSLQNDERY KLTTVVLEHT HDLIPADSRH FSMNKRIRTP VKRRLEVNDA AGIGVARNFH  180
SIVVEAGGYE ALTFDERDVR NYIENVRRLR LELGDAESVT LYFHKMQQQN SNFYSTIDLD  240
EDGRMRNLFW ADARSRAAYK AFGDVVSFDT TYLTKKYDMP FAPFVGVNHH GQTILFGCGL  300
LSNENTETFV WPFKEWLSCM SDAPPKAIIT DQCRAMQNAI EIVFPQARHR WCLWHVMKKI  360
PEKLRGYSQY EGIKVALQNA VYDSLTKDEF EGNWLTMVTK FNLNDNEWLG VLYRERHRWI  420
PAYVKDIF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G38180.1	1e-85	FAR1 family protein