PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | XP_028113585.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
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Family | ERF | ||||||||
Protein Properties | Length: 315aa MW: 35104.3 Da PI: 4.3492 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.9 | 2.2e-17 | 12 | 62 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr p r +r +lg+f ta eAa +++a+k ++g XP_028113585.1 12 CNYRGVRQRT-WGKWVAEIRQPD----RgRRLWLGTFPTALEAALVYDEAAKIMYG 62 56*****999.**********82....34***********************9987 PP |
Sequence ? help Back to Top |
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Protein Sequence Length: 315 aa Download sequence |
MKGKGGPENT YCNYRGVRQR TWGKWVAEIR QPDRGRRLWL GTFPTALEAA LVYDEAAKIM 60 YGPRAHLNFP NGGFSSESSK ESASLPSTSV SNSTTTSSHS DDLKVKLNAL KVKHEDGESE 120 SQIDCNRPFT DYEVGTSMSV VKEEVKEKPV NYRGKEEPTD FNGKTDYEVR TPMSVAKEEA 180 KEEPVNFNGK EDPADFNGKS EYRLSYLLNF SEDEMFDVGD LMGILDSDYE SEPVHDSGNV 240 GCANYSNLQD EKPSDLSHQL QNPDAKLLGS LQHMEQAPAG VDYGFDFSRS DGGEENYNFA 300 SNDLGFSDLD FNLDL |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G75490.1 | 3e-34 | ERF family protein |