PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | XP_028113584.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Theaceae; Camellia; Camellia sinensis
|
||||||||
Family | ERF | ||||||||
Protein Properties | Length: 372aa MW: 41580.7 Da PI: 4.7537 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 54.5 | 2.9e-17 | 69 | 119 | 1 | 55 |
AP2 1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 + y+GVr++ +g+WvAeIr p r +r +lg+f ta eAa +++a+k ++g XP_028113584.1 69 CNYRGVRQRT-WGKWVAEIRQPD----RgRRLWLGTFPTALEAALVYDEAAKIMYG 119 56*****999.**********82....34***********************9987 PP |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 372 aa Download sequence |
MSENTERKRK SRSRRDGSES VAETLAKWKE YNKRLDPLAD SPKPVCKVQA KGSRKGCMKG 60 KGGPENTYCN YRGVRQRTWG KWVAEIRQPD RGRRLWLGTF PTALEAALVY DEAAKIMYGP 120 RAHLNFPNGG FSSESSKESA SLPSTSVSNS TTTSSHSDDL KVKLNALKVK HEDGESESQI 180 DCNRPFTDYE VGTSMSVVKE EVKEKPVNYR GKEEPTDFNG KTDYEVRTPM SVAKEEAKEE 240 PVNFNGKEDP ADFNGKSEYR LSYLLNFSED EMFDVGDLMG ILDSDYESEP VHDSGNVGCA 300 NYSNLQDEKP SDLSHQLQNP DAKLLGSLQH MEQAPAGVDY GFDFSRSDGG EENYNFASND 360 LGFSDLDFNL DL |
Nucleic Localization Signal ? help Back to Top | |||
---|---|---|---|
No. | Start | End | Sequence |
1 | 9 | 16 | RKSRSRRD |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT2G40340.1 | 5e-44 | ERF family protein |